RNA–Protein interactions for RNA: ENST00000559853.5

AC012236.1-203, humanhuman

TSL 3

Gene AC012236.1, Length 648 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012236.1-203ENST00000559853 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
AC012236.1-203ENST00000559853 CHIC1Q5VXU3 224 aa14.7□□□□□ -0.06
AC012236.1-203ENST00000559853 NISCHQ9Y2I1 1504 aa14.32□□□□□ -0.12
AC012236.1-203ENST00000559853 SENP3Q9H4L4 574 aaPredicted RBP13.2□□□□□ -0.3
AC012236.1-203ENST00000559853 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
AC012236.1-203ENST00000559853 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
AC012236.1-203ENST00000559853 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
AC012236.1-203ENST00000559853 ABCC9O60706 1549 aa12.78□□□□□ -0.36
AC012236.1-203ENST00000559853 FOXD1Q16676 465 aa12.37□□□□□ -0.43
AC012236.1-203ENST00000559853 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
AC012236.1-203ENST00000559853 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
AC012236.1-203ENST00000559853 NACADO15069 1562 aa12.02□□□□□ -0.49
AC012236.1-203ENST00000559853 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
AC012236.1-203ENST00000559853 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
AC012236.1-203ENST00000559853 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
AC012236.1-203ENST00000559853 ZCCHC6Q5VYS8 1495 aaKnown RBP11.91□□□□□ -0.5
AC012236.1-203ENST00000559853 MSH5O43196 834 aa11.88□□□□□ -0.51
AC012236.1-203ENST00000559853 DNAJC5BQ9UF47 199 aa11.85□□□□□ -0.51
AC012236.1-203ENST00000559853 BICRAQ9NZM4 1560 aa11.81□□□□□ -0.52
AC012236.1-203ENST00000559853 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
AC012236.1-203ENST00000559853 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
AC012236.1-203ENST00000559853 DCAF1Q9Y4B6 1507 aa11.73□□□□□ -0.53
AC012236.1-203ENST00000559853 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
AC012236.1-203ENST00000559853 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
AC012236.1-203ENST00000559853 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
AC012236.1-203ENST00000559853 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
AC012236.1-203ENST00000559853 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
AC012236.1-203ENST00000559853 PIAS4Q8N2W9 510 aaPredicted RBP11.38□□□□□ -0.59
AC012236.1-203ENST00000559853 ADRA2BP18089 450 aa11.34□□□□□ -0.59
AC012236.1-203ENST00000559853 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
AC012236.1-203ENST00000559853 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
AC012236.1-203ENST00000559853 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
AC012236.1-203ENST00000559853 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
AC012236.1-203ENST00000559853 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
AC012236.1-203ENST00000559853 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
AC012236.1-203ENST00000559853 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
AC012236.1-203ENST00000559853 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
AC012236.1-203ENST00000559853 NESP48681 1621 aa11.03□□□□□ -0.64
AC012236.1-203ENST00000559853 WIZO95785 1651 aa11.03□□□□□ -0.64
AC012236.1-203ENST00000559853 PEG3Q9GZU2 1588 aa10.99□□□□□ -0.65
AC012236.1-203ENST00000559853 ERCC6Q03468 1493 aa10.98□□□□□ -0.65
AC012236.1-203ENST00000559853 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
AC012236.1-203ENST00000559853 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
AC012236.1-203ENST00000559853 THOC2Q8NI27 1593 aaKnown RBP10.86□□□□□ -0.67
AC012236.1-203ENST00000559853 LAMC3Q9Y6N6 1575 aa10.84□□□□□ -0.67
AC012236.1-203ENST00000559853 CUX2O14529 1486 aa10.82□□□□□ -0.68
AC012236.1-203ENST00000559853 TOP2AP11388 1531 aaKnown RBP10.81□□□□□ -0.68
AC012236.1-203ENST00000559853 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.69
AC012236.1-203ENST00000559853 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
AC012236.1-203ENST00000559853 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
AC012236.1-203ENST00000559853 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
AC012236.1-203ENST00000559853 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
AC012236.1-203ENST00000559853 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
AC012236.1-203ENST00000559853 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
AC012236.1-203ENST00000559853 WDR62O43379 1518 aa10.68□□□□□ -0.7
AC012236.1-203ENST00000559853 CFTRP13569 1480 aa10.68□□□□□ -0.7
AC012236.1-203ENST00000559853 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
AC012236.1-203ENST00000559853 DNAJC5Q9H3Z4 198 aa10.66□□□□□ -0.7
AC012236.1-203ENST00000559853 URB2Q14146 1524 aaKnown RBP10.64□□□□□ -0.71
AC012236.1-203ENST00000559853 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
AC012236.1-203ENST00000559853 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
AC012236.1-203ENST00000559853 PPP4R3CPQ6ZMV5 832 aa10.51□□□□□ -0.73
AC012236.1-203ENST00000559853 ZNF608Q9ULD9 1512 aaPredicted RBP10.51□□□□□ -0.73
AC012236.1-203ENST00000559853 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
AC012236.1-203ENST00000559853 EIF4G3O43432 1585 aaKnown RBP10.47□□□□□ -0.73
AC012236.1-203ENST00000559853 IFT140Q96RY7 1462 aa10.44□□□□□ -0.74
AC012236.1-203ENST00000559853 RAD54L2Q9Y4B4 1467 aa10.44□□□□□ -0.74
AC012236.1-203ENST00000559853 TARBP1Q13395 1621 aaKnown RBP10.43□□□□□ -0.74
AC012236.1-203ENST00000559853 CUX1P39880 1505 aa10.43□□□□□ -0.74
AC012236.1-203ENST00000559853 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
AC012236.1-203ENST00000559853 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
AC012236.1-203ENST00000559853 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
AC012236.1-203ENST00000559853 CHD1O14646 1710 aa10.41□□□□□ -0.74
AC012236.1-203ENST00000559853 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
AC012236.1-203ENST00000559853 SCAF1Q9H7N4 1312 aaKnown RBP10.4□□□□□ -0.74
AC012236.1-203ENST00000559853 ABCC8Q09428 1581 aa10.39□□□□□ -0.75
AC012236.1-203ENST00000559853 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
AC012236.1-203ENST00000559853 SOGA1O94964 1423 aa10.35□□□□□ -0.75
AC012236.1-203ENST00000559853 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
AC012236.1-203ENST00000559853 OSCARQ8IYS5 282 aa10.34□□□□□ -0.75
AC012236.1-203ENST00000559853 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
AC012236.1-203ENST00000559853 FBLN2P98095 1184 aa10.33□□□□□ -0.76
AC012236.1-203ENST00000559853 PBRM1Q86U86 1689 aa10.33□□□□□ -0.76
AC012236.1-203ENST00000559853 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
AC012236.1-203ENST00000559853 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
AC012236.1-203ENST00000559853 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
AC012236.1-203ENST00000559853 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
AC012236.1-203ENST00000559853 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
AC012236.1-203ENST00000559853 MAPK8IP2Q13387 824 aaPredicted RBP10.29□□□□□ -0.76
AC012236.1-203ENST00000559853 KCNA4P22459 653 aa10.28□□□□□ -0.76
AC012236.1-203ENST00000559853 BIVM-ERCC5R4GMW8 1640 aa10.27□□□□□ -0.77
AC012236.1-203ENST00000559853 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
AC012236.1-203ENST00000559853 ARHGEF11O15085 1522 aa10.26□□□□□ -0.77
AC012236.1-203ENST00000559853 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
AC012236.1-203ENST00000559853 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
AC012236.1-203ENST00000559853 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
AC012236.1-203ENST00000559853 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
AC012236.1-203ENST00000559853 CNKSR2Q8WXI2 1034 aa10.23□□□□□ -0.77
AC012236.1-203ENST00000559853 GRIN2BQ13224 1484 aa10.23□□□□□ -0.77
AC012236.1-203ENST00000559853 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms