RNA–Protein interactions for RNA: ENST00000559816.1

HDC-207, Transcript of histidine decarboxylase, humanhuman

TSL 2

Gene HDC, Length 2,046 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDC-207ENST00000559816 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
HDC-207ENST00000559816 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
HDC-207ENST00000559816 ABCC9O60706 1549 aa22.6■■□□□ 1.21
HDC-207ENST00000559816 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
HDC-207ENST00000559816 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.15
HDC-207ENST00000559816 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
HDC-207ENST00000559816 NACADO15069 1562 aa21.8■■□□□ 1.08
HDC-207ENST00000559816 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
HDC-207ENST00000559816 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
HDC-207ENST00000559816 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
HDC-207ENST00000559816 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
HDC-207ENST00000559816 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.01
HDC-207ENST00000559816 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
HDC-207ENST00000559816 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
HDC-207ENST00000559816 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
HDC-207ENST00000559816 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
HDC-207ENST00000559816 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
HDC-207ENST00000559816 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.88
HDC-207ENST00000559816 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
HDC-207ENST00000559816 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
HDC-207ENST00000559816 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
HDC-207ENST00000559816 WIZO95785 1651 aa20.43■□□□□ 0.86
HDC-207ENST00000559816 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
HDC-207ENST00000559816 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
HDC-207ENST00000559816 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
HDC-207ENST00000559816 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
HDC-207ENST00000559816 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
HDC-207ENST00000559816 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
HDC-207ENST00000559816 NCAPD3P42695 1498 aa20.19■□□□□ 0.82
HDC-207ENST00000559816 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
HDC-207ENST00000559816 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.8
HDC-207ENST00000559816 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
HDC-207ENST00000559816 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
HDC-207ENST00000559816 MYT1Q01538 1121 aa19.74■□□□□ 0.75
HDC-207ENST00000559816 NESP48681 1621 aa19.74■□□□□ 0.75
HDC-207ENST00000559816 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
HDC-207ENST00000559816 CFTRP13569 1480 aa19.65■□□□□ 0.74
HDC-207ENST00000559816 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
HDC-207ENST00000559816 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
HDC-207ENST00000559816 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
HDC-207ENST00000559816 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
HDC-207ENST00000559816 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
HDC-207ENST00000559816 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
HDC-207ENST00000559816 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
HDC-207ENST00000559816 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
HDC-207ENST00000559816 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
HDC-207ENST00000559816 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
HDC-207ENST00000559816 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
HDC-207ENST00000559816 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
HDC-207ENST00000559816 CUX1P39880 1505 aa19.29■□□□□ 0.68
HDC-207ENST00000559816 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.67
HDC-207ENST00000559816 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
HDC-207ENST00000559816 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
HDC-207ENST00000559816 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
HDC-207ENST00000559816 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
HDC-207ENST00000559816 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
HDC-207ENST00000559816 HRCP23327 699 aa19.15■□□□□ 0.66
HDC-207ENST00000559816 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
HDC-207ENST00000559816 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
HDC-207ENST00000559816 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
HDC-207ENST00000559816 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
HDC-207ENST00000559816 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
HDC-207ENST00000559816 SOGA1O94964 1423 aa19.1■□□□□ 0.65
HDC-207ENST00000559816 WDR62O43379 1518 aa19.08■□□□□ 0.65
HDC-207ENST00000559816 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
HDC-207ENST00000559816 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
HDC-207ENST00000559816 CUX2O14529 1486 aa19.03■□□□□ 0.64
HDC-207ENST00000559816 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
HDC-207ENST00000559816 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
HDC-207ENST00000559816 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.62
HDC-207ENST00000559816 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
HDC-207ENST00000559816 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
HDC-207ENST00000559816 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
HDC-207ENST00000559816 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
HDC-207ENST00000559816 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
HDC-207ENST00000559816 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
HDC-207ENST00000559816 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
HDC-207ENST00000559816 IGF1RP08069 1367 aa18.83■□□□□ 0.6
HDC-207ENST00000559816 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
HDC-207ENST00000559816 WDR97A6NE52 1622 aa18.81■□□□□ 0.6
HDC-207ENST00000559816 EEA1Q15075 1411 aa18.77■□□□□ 0.59
HDC-207ENST00000559816 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
HDC-207ENST00000559816 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
HDC-207ENST00000559816 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
HDC-207ENST00000559816 FBLN2P98095 1184 aa18.71■□□□□ 0.59
HDC-207ENST00000559816 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
HDC-207ENST00000559816 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
HDC-207ENST00000559816 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
HDC-207ENST00000559816 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
HDC-207ENST00000559816 PRXQ9BXM0 1461 aa18.66■□□□□ 0.58
HDC-207ENST00000559816 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
HDC-207ENST00000559816 PBRM1Q86U86 1689 aa18.64■□□□□ 0.58
HDC-207ENST00000559816 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.58
HDC-207ENST00000559816 CHMP7Q8WUX9 453 aaPredicted RBP18.62■□□□□ 0.57
HDC-207ENST00000559816 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.56
HDC-207ENST00000559816 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
HDC-207ENST00000559816 KIF21BO75037 1637 aa18.55■□□□□ 0.56
HDC-207ENST00000559816 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
HDC-207ENST00000559816 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
HDC-207ENST00000559816 CUL7Q14999 1698 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms