RNA–Protein interactions for RNA: ENST00000559146.5

PSMA4-210, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-210ENST00000559146 AEBP2Q6ZN18 517 aaPredicted RBP31.15■■■□□ 2.58
PSMA4-210ENST00000559146 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
PSMA4-210ENST00000559146 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
PSMA4-210ENST00000559146 PHF23Q9BUL5 403 aaPredicted RBP26.3■■□□□ 1.8
PSMA4-210ENST00000559146 FOXD1Q16676 465 aa24.7■■□□□ 1.54
PSMA4-210ENST00000559146 PLPPR3Q6T4P5 718 aa24.14■■□□□ 1.45
PSMA4-210ENST00000559146 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
PSMA4-210ENST00000559146 ADRA2BP18089 450 aa23.32■■□□□ 1.32
PSMA4-210ENST00000559146 PIAS4Q8N2W9 510 aaPredicted RBP23.2■■□□□ 1.3
PSMA4-210ENST00000559146 MSH5O43196 834 aa23.05■■□□□ 1.28
PSMA4-210ENST00000559146 POTEDQ86YR6 584 aa21.86■■□□□ 1.09
PSMA4-210ENST00000559146 SCAF1Q9H7N4 1312 aaKnown RBP21.44■■□□□ 1.02
PSMA4-210ENST00000559146 MAPK8IP2Q13387 824 aaPredicted RBP21.31■■□□□ 1
PSMA4-210ENST00000559146 PPP4R3CPQ6ZMV5 832 aa21.18■□□□□ 0.98
PSMA4-210ENST00000559146 DMRT2Q9Y5R5 561 aa21.12■□□□□ 0.97
PSMA4-210ENST00000559146 CNKSR2Q8WXI2 1034 aa20.72■□□□□ 0.91
PSMA4-210ENST00000559146 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
PSMA4-210ENST00000559146 HOXD11P31277 338 aaPredicted RBP20.47■□□□□ 0.87
PSMA4-210ENST00000559146 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
PSMA4-210ENST00000559146 DCAF8L1A6NGE4 600 aa20.31■□□□□ 0.84
PSMA4-210ENST00000559146 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
PSMA4-210ENST00000559146 KCNA4P22459 653 aa20.06■□□□□ 0.8
PSMA4-210ENST00000559146 NISCHQ9Y2I1 1504 aa19.85■□□□□ 0.77
PSMA4-210ENST00000559146 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
PSMA4-210ENST00000559146 RNF39Q9H2S5 420 aa19.65■□□□□ 0.74
PSMA4-210ENST00000559146 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
PSMA4-210ENST00000559146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.72
PSMA4-210ENST00000559146 C1QBPQ07021 282 aaKnown RBP19.44■□□□□ 0.7
PSMA4-210ENST00000559146 SLC4A2P04920 1241 aa19.13■□□□□ 0.65
PSMA4-210ENST00000559146 U3KPZ7 1027 aaPredicted RBP19.12■□□□□ 0.65
PSMA4-210ENST00000559146 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
PSMA4-210ENST00000559146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
PSMA4-210ENST00000559146 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
PSMA4-210ENST00000559146 CAPN15O75808 1086 aa18.77■□□□□ 0.6
PSMA4-210ENST00000559146 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
PSMA4-210ENST00000559146 APLP2Q06481 763 aa18.74■□□□□ 0.59
PSMA4-210ENST00000559146 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
PSMA4-210ENST00000559146 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
PSMA4-210ENST00000559146 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
PSMA4-210ENST00000559146 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
PSMA4-210ENST00000559146 DSG3P32926 999 aa18.53■□□□□ 0.56
PSMA4-210ENST00000559146 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
PSMA4-210ENST00000559146 ZBTB22O15209 634 aa18.4■□□□□ 0.54
PSMA4-210ENST00000559146 ABCB7O75027 752 aa18.32■□□□□ 0.52
PSMA4-210ENST00000559146 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
PSMA4-210ENST00000559146 POLA2Q14181 598 aa18.12■□□□□ 0.49
PSMA4-210ENST00000559146 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
PSMA4-210ENST00000559146 ABCC9O60706 1549 aa18.03■□□□□ 0.48
PSMA4-210ENST00000559146 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
PSMA4-210ENST00000559146 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
PSMA4-210ENST00000559146 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
PSMA4-210ENST00000559146 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
PSMA4-210ENST00000559146 RBM42Q9BTD8 480 aaKnown RBP17.73■□□□□ 0.43
PSMA4-210ENST00000559146 FBLN2P98095 1184 aa17.52■□□□□ 0.4
PSMA4-210ENST00000559146 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
PSMA4-210ENST00000559146 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
PSMA4-210ENST00000559146 MKRN4PQ13434 485 aaPredicted RBP17.32■□□□□ 0.36
PSMA4-210ENST00000559146 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
PSMA4-210ENST00000559146 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
PSMA4-210ENST00000559146 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
PSMA4-210ENST00000559146 POTEHQ6S545 545 aa17.23■□□□□ 0.35
PSMA4-210ENST00000559146 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
PSMA4-210ENST00000559146 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
PSMA4-210ENST00000559146 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
PSMA4-210ENST00000559146 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
PSMA4-210ENST00000559146 SSUH2Q9Y2M2 353 aa17.01■□□□□ 0.31
PSMA4-210ENST00000559146 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
PSMA4-210ENST00000559146 NACADO15069 1562 aa16.94■□□□□ 0.3
PSMA4-210ENST00000559146 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
PSMA4-210ENST00000559146 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
PSMA4-210ENST00000559146 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
PSMA4-210ENST00000559146 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
PSMA4-210ENST00000559146 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
PSMA4-210ENST00000559146 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.28
PSMA4-210ENST00000559146 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
PSMA4-210ENST00000559146 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
PSMA4-210ENST00000559146 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
PSMA4-210ENST00000559146 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
PSMA4-210ENST00000559146 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
PSMA4-210ENST00000559146 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
PSMA4-210ENST00000559146 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
PSMA4-210ENST00000559146 HAX1O00165 279 aa16.49■□□□□ 0.23
PSMA4-210ENST00000559146 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
PSMA4-210ENST00000559146 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
PSMA4-210ENST00000559146 DCAF1Q9Y4B6 1507 aa16.38■□□□□ 0.21
PSMA4-210ENST00000559146 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
PSMA4-210ENST00000559146 PROM2Q8N271 834 aa16.33■□□□□ 0.2
PSMA4-210ENST00000559146 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
PSMA4-210ENST00000559146 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
PSMA4-210ENST00000559146 FKBP8Q14318 412 aa16.26■□□□□ 0.19
PSMA4-210ENST00000559146 FARP1Q9Y4F1 1045 aaPredicted RBP16.26■□□□□ 0.19
PSMA4-210ENST00000559146 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
PSMA4-210ENST00000559146 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
PSMA4-210ENST00000559146 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
PSMA4-210ENST00000559146 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
PSMA4-210ENST00000559146 EVX2Q03828 476 aa16.21■□□□□ 0.19
PSMA4-210ENST00000559146 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
PSMA4-210ENST00000559146 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
PSMA4-210ENST00000559146 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
PSMA4-210ENST00000559146 PLEKHG5O94827 1062 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms