RNA–Protein interactions for RNA: ENST00000559073.1

CD276-206, Transcript of CD276 molecule, humanhuman

TSL 1 (best)

Gene CD276, Length 1,844 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD276-206ENST00000559073 NISCHQ9Y2I1 1504 aa33.16■■■□□ 2.9
CD276-206ENST00000559073 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
CD276-206ENST00000559073 ABCC9O60706 1549 aa28.43■■■□□ 2.14
CD276-206ENST00000559073 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
CD276-206ENST00000559073 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
CD276-206ENST00000559073 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
CD276-206ENST00000559073 NACADO15069 1562 aa27.37■■□□□ 1.97
CD276-206ENST00000559073 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
CD276-206ENST00000559073 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
CD276-206ENST00000559073 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.88
CD276-206ENST00000559073 SCRIBQ14160 1630 aa26.8■■□□□ 1.88
CD276-206ENST00000559073 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
CD276-206ENST00000559073 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
CD276-206ENST00000559073 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
CD276-206ENST00000559073 DNAJC5BQ9UF47 199 aa26.02■■□□□ 1.76
CD276-206ENST00000559073 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
CD276-206ENST00000559073 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
CD276-206ENST00000559073 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
CD276-206ENST00000559073 SMARCA4P51532 1647 aa25.64■■□□□ 1.7
CD276-206ENST00000559073 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.7
CD276-206ENST00000559073 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
CD276-206ENST00000559073 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
CD276-206ENST00000559073 WIZO95785 1651 aa25.4■■□□□ 1.66
CD276-206ENST00000559073 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
CD276-206ENST00000559073 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.64
CD276-206ENST00000559073 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
CD276-206ENST00000559073 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
CD276-206ENST00000559073 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CD276-206ENST00000559073 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
CD276-206ENST00000559073 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
CD276-206ENST00000559073 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
CD276-206ENST00000559073 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
CD276-206ENST00000559073 NESP48681 1621 aa24.66■■□□□ 1.54
CD276-206ENST00000559073 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
CD276-206ENST00000559073 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
CD276-206ENST00000559073 CFTRP13569 1480 aa24.5■■□□□ 1.51
CD276-206ENST00000559073 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
CD276-206ENST00000559073 PRDM2Q13029 1718 aa24.42■■□□□ 1.5
CD276-206ENST00000559073 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
CD276-206ENST00000559073 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
CD276-206ENST00000559073 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
CD276-206ENST00000559073 THOC2Q8NI27 1593 aaKnown RBP24.21■■□□□ 1.47
CD276-206ENST00000559073 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.47
CD276-206ENST00000559073 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CD276-206ENST00000559073 CUX2O14529 1486 aa24.12■■□□□ 1.45
CD276-206ENST00000559073 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
CD276-206ENST00000559073 WDR62O43379 1518 aa24.05■■□□□ 1.44
CD276-206ENST00000559073 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
CD276-206ENST00000559073 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
CD276-206ENST00000559073 CUX1P39880 1505 aa23.98■■□□□ 1.43
CD276-206ENST00000559073 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
CD276-206ENST00000559073 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
CD276-206ENST00000559073 SYNJ1O43426 1573 aa23.95■■□□□ 1.42
CD276-206ENST00000559073 TOP2BQ02880 1626 aa23.89■■□□□ 1.41
CD276-206ENST00000559073 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.41
CD276-206ENST00000559073 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
CD276-206ENST00000559073 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
CD276-206ENST00000559073 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
CD276-206ENST00000559073 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
CD276-206ENST00000559073 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
CD276-206ENST00000559073 SOGA1O94964 1423 aa23.71■■□□□ 1.39
CD276-206ENST00000559073 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
CD276-206ENST00000559073 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
CD276-206ENST00000559073 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
CD276-206ENST00000559073 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
CD276-206ENST00000559073 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
CD276-206ENST00000559073 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
CD276-206ENST00000559073 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
CD276-206ENST00000559073 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
CD276-206ENST00000559073 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
CD276-206ENST00000559073 ABCA5Q8WWZ7 1642 aa23.46■■□□□ 1.35
CD276-206ENST00000559073 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
CD276-206ENST00000559073 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
CD276-206ENST00000559073 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
CD276-206ENST00000559073 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
CD276-206ENST00000559073 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
CD276-206ENST00000559073 IGF1RP08069 1367 aa23.31■■□□□ 1.32
CD276-206ENST00000559073 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
CD276-206ENST00000559073 DNAJC5Q9H3Z4 198 aa23.27■■□□□ 1.32
CD276-206ENST00000559073 SNAPC4Q5SXM2 1469 aa23.27■■□□□ 1.32
CD276-206ENST00000559073 EEA1Q15075 1411 aa23.27■■□□□ 1.32
CD276-206ENST00000559073 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
CD276-206ENST00000559073 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
CD276-206ENST00000559073 FBLN2P98095 1184 aa23.21■■□□□ 1.31
CD276-206ENST00000559073 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
CD276-206ENST00000559073 CHD1O14646 1710 aa23.2■■□□□ 1.3
CD276-206ENST00000559073 CUL7Q14999 1698 aa23.19■■□□□ 1.3
CD276-206ENST00000559073 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
CD276-206ENST00000559073 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
CD276-206ENST00000559073 FHAD1B1AJZ9 1412 aa23.15■■□□□ 1.3
CD276-206ENST00000559073 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CD276-206ENST00000559073 SYNJ2O15056 1496 aa23.14■■□□□ 1.3
CD276-206ENST00000559073 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
CD276-206ENST00000559073 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
CD276-206ENST00000559073 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.28
CD276-206ENST00000559073 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
CD276-206ENST00000559073 KIF21BO75037 1637 aa23.04■■□□□ 1.28
CD276-206ENST00000559073 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
CD276-206ENST00000559073 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
CD276-206ENST00000559073 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms