RNA–Protein interactions for RNA: ENST00000558948.1

AC013652.2-202, humanhuman

TSL 3 BASIC

Gene AC013652.2, Length 910 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013652.2-202ENST00000558948 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
AC013652.2-202ENST00000558948 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
AC013652.2-202ENST00000558948 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
AC013652.2-202ENST00000558948 PHF23Q9BUL5 403 aaPredicted RBP24.69■■□□□ 1.54
AC013652.2-202ENST00000558948 FOXD1Q16676 465 aa23.36■■□□□ 1.33
AC013652.2-202ENST00000558948 MSH5O43196 834 aa22.07■■□□□ 1.12
AC013652.2-202ENST00000558948 POTEDQ86YR6 584 aa22.05■■□□□ 1.12
AC013652.2-202ENST00000558948 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
AC013652.2-202ENST00000558948 PIAS4Q8N2W9 510 aaPredicted RBP21.79■■□□□ 1.08
AC013652.2-202ENST00000558948 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
AC013652.2-202ENST00000558948 ADRA2BP18089 450 aa21.48■■□□□ 1.03
AC013652.2-202ENST00000558948 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
AC013652.2-202ENST00000558948 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
AC013652.2-202ENST00000558948 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
AC013652.2-202ENST00000558948 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
AC013652.2-202ENST00000558948 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
AC013652.2-202ENST00000558948 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
AC013652.2-202ENST00000558948 HOXD11P31277 338 aaPredicted RBP18.95■□□□□ 0.62
AC013652.2-202ENST00000558948 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
AC013652.2-202ENST00000558948 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
AC013652.2-202ENST00000558948 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
AC013652.2-202ENST00000558948 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
AC013652.2-202ENST00000558948 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
AC013652.2-202ENST00000558948 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
AC013652.2-202ENST00000558948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
AC013652.2-202ENST00000558948 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
AC013652.2-202ENST00000558948 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
AC013652.2-202ENST00000558948 CAPN15O75808 1086 aa17.51■□□□□ 0.39
AC013652.2-202ENST00000558948 DSG3P32926 999 aa17.45■□□□□ 0.38
AC013652.2-202ENST00000558948 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
AC013652.2-202ENST00000558948 KCNA4P22459 653 aa17.3■□□□□ 0.36
AC013652.2-202ENST00000558948 POTEHQ6S545 545 aa17.24■□□□□ 0.35
AC013652.2-202ENST00000558948 APLP2Q06481 763 aa17.23■□□□□ 0.35
AC013652.2-202ENST00000558948 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
AC013652.2-202ENST00000558948 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
AC013652.2-202ENST00000558948 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
AC013652.2-202ENST00000558948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
AC013652.2-202ENST00000558948 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
AC013652.2-202ENST00000558948 ABCB7O75027 752 aa17.03■□□□□ 0.32
AC013652.2-202ENST00000558948 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
AC013652.2-202ENST00000558948 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
AC013652.2-202ENST00000558948 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
AC013652.2-202ENST00000558948 POLA2Q14181 598 aa16.59■□□□□ 0.25
AC013652.2-202ENST00000558948 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
AC013652.2-202ENST00000558948 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
AC013652.2-202ENST00000558948 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
AC013652.2-202ENST00000558948 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
AC013652.2-202ENST00000558948 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
AC013652.2-202ENST00000558948 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
AC013652.2-202ENST00000558948 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
AC013652.2-202ENST00000558948 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
AC013652.2-202ENST00000558948 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
AC013652.2-202ENST00000558948 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
AC013652.2-202ENST00000558948 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
AC013652.2-202ENST00000558948 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
AC013652.2-202ENST00000558948 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
AC013652.2-202ENST00000558948 ZBTB22O15209 634 aa15.85■□□□□ 0.13
AC013652.2-202ENST00000558948 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
AC013652.2-202ENST00000558948 HAX1O00165 279 aa15.82■□□□□ 0.12
AC013652.2-202ENST00000558948 FBLN2P98095 1184 aa15.74■□□□□ 0.11
AC013652.2-202ENST00000558948 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
AC013652.2-202ENST00000558948 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
AC013652.2-202ENST00000558948 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
AC013652.2-202ENST00000558948 SPDYE1Q8NFV5 336 aaPredicted RBP15.55■□□□□ 0.08
AC013652.2-202ENST00000558948 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
AC013652.2-202ENST00000558948 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
AC013652.2-202ENST00000558948 EVX2Q03828 476 aa15.49■□□□□ 0.07
AC013652.2-202ENST00000558948 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
AC013652.2-202ENST00000558948 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
AC013652.2-202ENST00000558948 SSUH2Q9Y2M2 353 aa15.44■□□□□ 0.06
AC013652.2-202ENST00000558948 C19orf67A6NJJ6 358 aa15.33■□□□□ 0.04
AC013652.2-202ENST00000558948 PRR29P0C7W0 189 aa15.24■□□□□ 0.03
AC013652.2-202ENST00000558948 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
AC013652.2-202ENST00000558948 CHADLQ6NUI6 762 aa15.21■□□□□ 0.03
AC013652.2-202ENST00000558948 GABBR2O75899 941 aa15.19■□□□□ 0.02
AC013652.2-202ENST00000558948 LHX8Q68G74 356 aa15.02■□□□□ -0
AC013652.2-202ENST00000558948 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
AC013652.2-202ENST00000558948 FARP1Q9Y4F1 1045 aaPredicted RBP14.99□□□□□ -0.01
AC013652.2-202ENST00000558948 CLCN6P51797 869 aa14.94□□□□□ -0.02
AC013652.2-202ENST00000558948 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
AC013652.2-202ENST00000558948 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
AC013652.2-202ENST00000558948 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
AC013652.2-202ENST00000558948 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
AC013652.2-202ENST00000558948 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
AC013652.2-202ENST00000558948 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
AC013652.2-202ENST00000558948 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
AC013652.2-202ENST00000558948 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
AC013652.2-202ENST00000558948 ABCC9O60706 1549 aa14.69□□□□□ -0.06
AC013652.2-202ENST00000558948 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
AC013652.2-202ENST00000558948 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
AC013652.2-202ENST00000558948 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
AC013652.2-202ENST00000558948 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
AC013652.2-202ENST00000558948 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
AC013652.2-202ENST00000558948 PHF12Q96QT6 1004 aa14.45□□□□□ -0.1
AC013652.2-202ENST00000558948 MNX1P50219 401 aaPredicted RBP14.39□□□□□ -0.11
AC013652.2-202ENST00000558948 OTUD5Q96G74 571 aa14.36□□□□□ -0.11
AC013652.2-202ENST00000558948 PLSCR2Q9NRY7 297 aa14.33□□□□□ -0.12
AC013652.2-202ENST00000558948 POTEB2H3BUK9 544 aa14.31□□□□□ -0.12
AC013652.2-202ENST00000558948 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
AC013652.2-202ENST00000558948 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms