RNA–Protein interactions for RNA: ENST00000558783.2

AC087632.1-215, human

TSL 5

Gene AC087632.1, Length 726 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AC087632.1-215	ENST00000558783	SUB1	P53999	127 aa	Known RBP eCLIP	1.5	□□□□□ -2.17	6e-21	■■■■■ 173.8
AC087632.1-215	ENST00000558783	SF3B1	O75533	1304 aa	Known RBP eCLIP	2.35	□□□□□ -2.03	4e-7	■■■■■ 86.2
AC087632.1-215	ENST00000558783	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	6.46	□□□□□ -1.38	3e-8	■■■■■ 83.8
AC087632.1-215	ENST00000558783	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.88	□□□□□ -1.63	1e-8	■■■■■ 37.5
AC087632.1-215	ENST00000558783	U2AF2	P26368	475 aa	Known RBP eCLIP	2.48	□□□□□ -2.01	2e-8	■■■■■ 31.7
AC087632.1-215	ENST00000558783	QKI	Q96PU8	341 aa	Known RBP eCLIP	1.56	□□□□□ -2.16	1e-6	■■■■■ 27.1
AC087632.1-215	ENST00000558783	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.52	□□□□□ -1.69	9e-16	■■■■■ 27
AC087632.1-215	ENST00000558783	PRPF4	O43172	522 aa	Known RBP eCLIP	3.54	□□□□□ -1.84	2e-7	■■■■□ 26.6
AC087632.1-215	ENST00000558783	NONO	Q15233	471 aa	Known RBP eCLIP	2.7	□□□□□ -1.98	2e-7	■■■■□ 25.9
AC087632.1-215	ENST00000558783	NKRF	O15226	690 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	1e-6	■■■■□ 25.7
AC087632.1-215	ENST00000558783	TIA1	P31483	386 aa	Known RBP eCLIP	2.22	□□□□□ -2.05	4e-7	■■■■□ 23.9
AC087632.1-215	ENST00000558783	RPS3	P23396	243 aa	Known RBP eCLIP	1.5	□□□□□ -2.17	1e-7	■■■■□ 21
AC087632.1-215	ENST00000558783	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.16	□□□□□ -1.74	2e-6	■■■■□ 20.6
AC087632.1-215	ENST00000558783	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	2.73	□□□□□ -1.97	4e-8	■■■□□ 17
AC087632.1-215	ENST00000558783	EFTUD2	Q15029	972 aa	Known RBP eCLIP	2.52	□□□□□ -2.01	1e-5	■■■□□ 16.7
AC087632.1-215	ENST00000558783	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.43	□□□□□ -1.54	2e-7	■■■□□ 16
AC087632.1-215	ENST00000558783	KHSRP	Q92945	711 aa	Known RBP eCLIP	8.87	□□□□□ -0.99	7e-8	■■■□□ 15.6
AC087632.1-215	ENST00000558783	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.65	□□□□□ -1.67	2e-7	■■■□□ 15.5
AC087632.1-215	ENST00000558783	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	2.54	□□□□□ -2	2e-6	■■■□□ 15.4
AC087632.1-215	ENST00000558783	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.42	□□□□□ -1.54	2e-7	■■□□□ 14.4
AC087632.1-215	ENST00000558783	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.25	□□□□□ -1.73	9e-8	■■□□□ 14
AC087632.1-215	ENST00000558783	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	1.85	□□□□□ -2.11	7e-6	■■□□□ 13.7
AC087632.1-215	ENST00000558783	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.27	□□□□□ -1.73	4e-14	■■□□□ 13.4
AC087632.1-215	ENST00000558783	DDX3X	O00571	662 aa	Known RBP eCLIP	4.85	□□□□□ -1.63	2e-6	■■□□□ 11.9
AC087632.1-215	ENST00000558783	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.63	□□□□□ -1.67	5e-16	■■□□□ 11.7
AC087632.1-215	ENST00000558783	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.92	□□□□□ -1.62	7e-48	■■□□□ 11.6
AC087632.1-215	ENST00000558783	YBX3	P16989	372 aa	Known RBP eCLIP	5.64	□□□□□ -1.51	2e-18	■□□□□ 11
AC087632.1-215	ENST00000558783	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	2.43	□□□□□ -2.02	2e-6	■□□□□ 10.8
AC087632.1-215	ENST00000558783	RBFOX2	O43251	390 aa	Known RBP eCLIP	1.44	□□□□□ -2.18	3e-8	■□□□□ 9.6
AC087632.1-215	ENST00000558783	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.28	□□□□□ -1.88	2e-6	■□□□□ 8.8
AC087632.1-215	ENST00000558783	SF3A3	Q12874	501 aa	Known RBP eCLIP	3.44	□□□□□ -1.86	1e-6	■□□□□ 8.6

Retrieved 31 of 31 RNA–protein pairs in 77.5 ms