RNA–Protein interactions for RNA: ENST00000558756.5

SLTM-217, Transcript of SAFB like transcription modulator, humanhuman

TSL 5

Gene SLTM, Length 896 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-217ENST00000558756 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
SLTM-217ENST00000558756 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
SLTM-217ENST00000558756 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
SLTM-217ENST00000558756 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
SLTM-217ENST00000558756 FOXD1Q16676 465 aa22.49■■□□□ 1.19
SLTM-217ENST00000558756 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
SLTM-217ENST00000558756 MSH5O43196 834 aa21.05■□□□□ 0.96
SLTM-217ENST00000558756 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
SLTM-217ENST00000558756 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
SLTM-217ENST00000558756 ADRA2BP18089 450 aa20.88■□□□□ 0.93
SLTM-217ENST00000558756 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
SLTM-217ENST00000558756 MAPK8IP2Q13387 824 aaPredicted RBP19.2■□□□□ 0.66
SLTM-217ENST00000558756 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
SLTM-217ENST00000558756 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
SLTM-217ENST00000558756 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
SLTM-217ENST00000558756 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
SLTM-217ENST00000558756 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
SLTM-217ENST00000558756 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
SLTM-217ENST00000558756 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
SLTM-217ENST00000558756 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
SLTM-217ENST00000558756 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
SLTM-217ENST00000558756 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
SLTM-217ENST00000558756 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
SLTM-217ENST00000558756 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
SLTM-217ENST00000558756 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
SLTM-217ENST00000558756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.397e-7■■■■□ 20.5
SLTM-217ENST00000558756 KCNA4P22459 653 aa17.26■□□□□ 0.35
SLTM-217ENST00000558756 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
SLTM-217ENST00000558756 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
SLTM-217ENST00000558756 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
SLTM-217ENST00000558756 CAPN15O75808 1086 aa16.87■□□□□ 0.29
SLTM-217ENST00000558756 DSG3P32926 999 aa16.8■□□□□ 0.28
SLTM-217ENST00000558756 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
SLTM-217ENST00000558756 APLP2Q06481 763 aa16.58■□□□□ 0.24
SLTM-217ENST00000558756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
SLTM-217ENST00000558756 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
SLTM-217ENST00000558756 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
SLTM-217ENST00000558756 ABCB7O75027 752 aa16.5■□□□□ 0.23
SLTM-217ENST00000558756 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
SLTM-217ENST00000558756 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
SLTM-217ENST00000558756 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
SLTM-217ENST00000558756 POTEHQ6S545 545 aa16.23■□□□□ 0.19
SLTM-217ENST00000558756 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
SLTM-217ENST00000558756 POLA2Q14181 598 aa16.1■□□□□ 0.17
SLTM-217ENST00000558756 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
SLTM-217ENST00000558756 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
SLTM-217ENST00000558756 ZBTB22O15209 634 aa15.89■□□□□ 0.13
SLTM-217ENST00000558756 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
SLTM-217ENST00000558756 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
SLTM-217ENST00000558756 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
SLTM-217ENST00000558756 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
SLTM-217ENST00000558756 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
SLTM-217ENST00000558756 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
SLTM-217ENST00000558756 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
SLTM-217ENST00000558756 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
SLTM-217ENST00000558756 FBLN2P98095 1184 aa15.33■□□□□ 0.04
SLTM-217ENST00000558756 SPDYE2BA6NHP3 402 aa15.26■□□□□ 0.03
SLTM-217ENST00000558756 SPDYE6P0CI01 402 aa15.26■□□□□ 0.03
SLTM-217ENST00000558756 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
SLTM-217ENST00000558756 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
SLTM-217ENST00000558756 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.036e-6■■■■□ 25.8
SLTM-217ENST00000558756 SP7Q8TDD2 431 aaPredicted RBP15.17■□□□□ 0.02
SLTM-217ENST00000558756 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
SLTM-217ENST00000558756 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
SLTM-217ENST00000558756 HAX1O00165 279 aa15.05■□□□□ -0
SLTM-217ENST00000558756 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
SLTM-217ENST00000558756 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
SLTM-217ENST00000558756 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
SLTM-217ENST00000558756 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
SLTM-217ENST00000558756 EVX2Q03828 476 aa14.9□□□□□ -0.02
SLTM-217ENST00000558756 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
SLTM-217ENST00000558756 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
SLTM-217ENST00000558756 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
SLTM-217ENST00000558756 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
SLTM-217ENST00000558756 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
SLTM-217ENST00000558756 GABBR2O75899 941 aa14.53□□□□□ -0.08
SLTM-217ENST00000558756 FARP1Q9Y4F1 1045 aaPredicted RBP14.51□□□□□ -0.09
SLTM-217ENST00000558756 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
SLTM-217ENST00000558756 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
SLTM-217ENST00000558756 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
SLTM-217ENST00000558756 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
SLTM-217ENST00000558756 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
SLTM-217ENST00000558756 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
SLTM-217ENST00000558756 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
SLTM-217ENST00000558756 CLCN6P51797 869 aa14.21□□□□□ -0.13
SLTM-217ENST00000558756 LHX8Q68G74 356 aa14.21□□□□□ -0.13
SLTM-217ENST00000558756 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
SLTM-217ENST00000558756 DCBLD2Q96PD2 775 aa14.11□□□□□ -0.15
SLTM-217ENST00000558756 PROM2Q8N271 834 aa14.1□□□□□ -0.15
SLTM-217ENST00000558756 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
SLTM-217ENST00000558756 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
SLTM-217ENST00000558756 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLTM-217ENST00000558756 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
SLTM-217ENST00000558756 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
SLTM-217ENST00000558756 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
SLTM-217ENST00000558756 PELP1Q8IZL8 1130 aaKnown RBP13.81□□□□□ -0.2
SLTM-217ENST00000558756 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
SLTM-217ENST00000558756 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
SLTM-217ENST00000558756 MIER1Q8N108 512 aa13.77□□□□□ -0.21
SLTM-217ENST00000558756 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms