RNA–Protein interactions for RNA: ENST00000558675.1

AC012377.1-202, humanhuman

BASIC

Gene AC012377.1, Length 4,811 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012377.1-202ENST00000558675 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
AC012377.1-202ENST00000558675 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
AC012377.1-202ENST00000558675 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.14
AC012377.1-202ENST00000558675 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
AC012377.1-202ENST00000558675 ABCC9O60706 1549 aa15.51■□□□□ 0.07
AC012377.1-202ENST00000558675 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
AC012377.1-202ENST00000558675 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
AC012377.1-202ENST00000558675 FAM9AQ8IZU1 332 aaPredicted RBP15.08■□□□□ 0
AC012377.1-202ENST00000558675 RANGAP1P46060 587 aaPredicted RBP14.92□□□□□ -0.02
AC012377.1-202ENST00000558675 APLP2Q06481 763 aa14.79□□□□□ -0.04
AC012377.1-202ENST00000558675 ATP1B4Q9UN42 357 aaPredicted RBP14.79□□□□□ -0.04
AC012377.1-202ENST00000558675 TTBK1Q5TCY1 1321 aaPredicted RBP14.74□□□□□ -0.05
AC012377.1-202ENST00000558675 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
AC012377.1-202ENST00000558675 UBTFP17480 764 aaKnown RBP14.59□□□□□ -0.07
AC012377.1-202ENST00000558675 FBLN2P98095 1184 aa14.53□□□□□ -0.08
AC012377.1-202ENST00000558675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.08
AC012377.1-202ENST00000558675 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.08
AC012377.1-202ENST00000558675 MYT1LQ9UL68 1186 aa14.47□□□□□ -0.09
AC012377.1-202ENST00000558675 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
AC012377.1-202ENST00000558675 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
AC012377.1-202ENST00000558675 CCDC180Q9P1Z9 1646 aa14.2□□□□□ -0.14
AC012377.1-202ENST00000558675 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
AC012377.1-202ENST00000558675 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
AC012377.1-202ENST00000558675 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.16
AC012377.1-202ENST00000558675 NACADO15069 1562 aa14.01□□□□□ -0.17
AC012377.1-202ENST00000558675 ITGAEP38570 1179 aa14□□□□□ -0.17
AC012377.1-202ENST00000558675 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
AC012377.1-202ENST00000558675 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
AC012377.1-202ENST00000558675 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
AC012377.1-202ENST00000558675 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
AC012377.1-202ENST00000558675 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
AC012377.1-202ENST00000558675 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
AC012377.1-202ENST00000558675 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
AC012377.1-202ENST00000558675 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
AC012377.1-202ENST00000558675 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
AC012377.1-202ENST00000558675 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
AC012377.1-202ENST00000558675 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
AC012377.1-202ENST00000558675 FAM50AQ14320 339 aaKnown RBP13.71□□□□□ -0.21
AC012377.1-202ENST00000558675 ZNF777Q9ULD5 760 aaPredicted RBP13.7□□□□□ -0.22
AC012377.1-202ENST00000558675 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
AC012377.1-202ENST00000558675 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
AC012377.1-202ENST00000558675 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
AC012377.1-202ENST00000558675 CDK11AQ9UQ88 783 aaPredicted RBP13.67□□□□□ -0.22
AC012377.1-202ENST00000558675 BCANQ96GW7 911 aa13.65□□□□□ -0.22
AC012377.1-202ENST00000558675 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
AC012377.1-202ENST00000558675 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
AC012377.1-202ENST00000558675 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
AC012377.1-202ENST00000558675 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
AC012377.1-202ENST00000558675 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
AC012377.1-202ENST00000558675 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
AC012377.1-202ENST00000558675 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
AC012377.1-202ENST00000558675 BAZ1AQ9NRL2 1556 aaPredicted RBP13.48□□□□□ -0.25
AC012377.1-202ENST00000558675 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
AC012377.1-202ENST00000558675 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
AC012377.1-202ENST00000558675 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
AC012377.1-202ENST00000558675 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
AC012377.1-202ENST00000558675 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
AC012377.1-202ENST00000558675 PLEKHD1A6NEE1 506 aa13.39□□□□□ -0.27
AC012377.1-202ENST00000558675 ZNF326Q5BKZ1 582 aaKnown RBP13.39□□□□□ -0.27
AC012377.1-202ENST00000558675 CYB5RLQ6IPT4 315 aa13.38□□□□□ -0.27
AC012377.1-202ENST00000558675 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
AC012377.1-202ENST00000558675 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
AC012377.1-202ENST00000558675 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
AC012377.1-202ENST00000558675 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
AC012377.1-202ENST00000558675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
AC012377.1-202ENST00000558675 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
AC012377.1-202ENST00000558675 TSPY4P0CV99 314 aa13.33□□□□□ -0.27
AC012377.1-202ENST00000558675 TSPY10P0CW01 314 aa13.33□□□□□ -0.27
AC012377.1-202ENST00000558675 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
AC012377.1-202ENST00000558675 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
AC012377.1-202ENST00000558675 NEUROD1Q13562 356 aa13.28□□□□□ -0.28
AC012377.1-202ENST00000558675 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
AC012377.1-202ENST00000558675 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
AC012377.1-202ENST00000558675 CHIC2Q9UKJ5 165 aa13.27□□□□□ -0.29
AC012377.1-202ENST00000558675 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
AC012377.1-202ENST00000558675 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
AC012377.1-202ENST00000558675 SOGA1O94964 1423 aa13.25□□□□□ -0.29
AC012377.1-202ENST00000558675 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
AC012377.1-202ENST00000558675 MLECQ14165 292 aa13.24□□□□□ -0.29
AC012377.1-202ENST00000558675 CUX2O14529 1486 aa13.23□□□□□ -0.29
AC012377.1-202ENST00000558675 AEBP2Q6ZN18 517 aaPredicted RBP13.2□□□□□ -0.3
AC012377.1-202ENST00000558675 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
AC012377.1-202ENST00000558675 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
AC012377.1-202ENST00000558675 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
AC012377.1-202ENST00000558675 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
AC012377.1-202ENST00000558675 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
AC012377.1-202ENST00000558675 CFDP1Q9UEE9 299 aaPredicted RBP13.15□□□□□ -0.3
AC012377.1-202ENST00000558675 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
AC012377.1-202ENST00000558675 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
AC012377.1-202ENST00000558675 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
AC012377.1-202ENST00000558675 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
AC012377.1-202ENST00000558675 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
AC012377.1-202ENST00000558675 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
AC012377.1-202ENST00000558675 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
AC012377.1-202ENST00000558675 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
AC012377.1-202ENST00000558675 CLIP1P30622 1438 aa13.05□□□□□ -0.32
AC012377.1-202ENST00000558675 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
AC012377.1-202ENST00000558675 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
AC012377.1-202ENST00000558675 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
AC012377.1-202ENST00000558675 GGT6Q6P531 493 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms