RNA–Protein interactions for RNA: ENST00000558154.1

PCSK6-204, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 2

Gene PCSK6, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-204ENST00000558154 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
PCSK6-204ENST00000558154 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
PCSK6-204ENST00000558154 ABCC9O60706 1549 aa28.62■■■□□ 2.17
PCSK6-204ENST00000558154 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
PCSK6-204ENST00000558154 NACADO15069 1562 aa27.21■■□□□ 1.95
PCSK6-204ENST00000558154 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
PCSK6-204ENST00000558154 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
PCSK6-204ENST00000558154 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
PCSK6-204ENST00000558154 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
PCSK6-204ENST00000558154 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
PCSK6-204ENST00000558154 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
PCSK6-204ENST00000558154 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
PCSK6-204ENST00000558154 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
PCSK6-204ENST00000558154 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
PCSK6-204ENST00000558154 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
PCSK6-204ENST00000558154 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
PCSK6-204ENST00000558154 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
PCSK6-204ENST00000558154 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
PCSK6-204ENST00000558154 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
PCSK6-204ENST00000558154 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
PCSK6-204ENST00000558154 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
PCSK6-204ENST00000558154 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
PCSK6-204ENST00000558154 BAZ1AQ9NRL2 1556 aaPredicted RBP25.02■■□□□ 1.6
PCSK6-204ENST00000558154 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
PCSK6-204ENST00000558154 PEG3Q9GZU2 1588 aa24.85■■□□□ 1.57
PCSK6-204ENST00000558154 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
PCSK6-204ENST00000558154 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
PCSK6-204ENST00000558154 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
PCSK6-204ENST00000558154 NESP48681 1621 aa24.65■■□□□ 1.54
PCSK6-204ENST00000558154 WIZO95785 1651 aa24.64■■□□□ 1.53
PCSK6-204ENST00000558154 CUX2O14529 1486 aa24.55■■□□□ 1.52
PCSK6-204ENST00000558154 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
PCSK6-204ENST00000558154 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
PCSK6-204ENST00000558154 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
PCSK6-204ENST00000558154 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
PCSK6-204ENST00000558154 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
PCSK6-204ENST00000558154 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
PCSK6-204ENST00000558154 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
PCSK6-204ENST00000558154 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
PCSK6-204ENST00000558154 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
PCSK6-204ENST00000558154 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
PCSK6-204ENST00000558154 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
PCSK6-204ENST00000558154 WDR62O43379 1518 aa24.09■■□□□ 1.45
PCSK6-204ENST00000558154 CFTRP13569 1480 aa24.07■■□□□ 1.44
PCSK6-204ENST00000558154 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
PCSK6-204ENST00000558154 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
PCSK6-204ENST00000558154 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
PCSK6-204ENST00000558154 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
PCSK6-204ENST00000558154 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
PCSK6-204ENST00000558154 ABCC8Q09428 1581 aa23.59■■□□□ 1.37
PCSK6-204ENST00000558154 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
PCSK6-204ENST00000558154 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
PCSK6-204ENST00000558154 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
PCSK6-204ENST00000558154 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
PCSK6-204ENST00000558154 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
PCSK6-204ENST00000558154 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
PCSK6-204ENST00000558154 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
PCSK6-204ENST00000558154 CHD1O14646 1710 aa23.37■■□□□ 1.33
PCSK6-204ENST00000558154 CUX1P39880 1505 aa23.33■■□□□ 1.33
PCSK6-204ENST00000558154 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.327e-7■□□□□ 8.1
PCSK6-204ENST00000558154 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
PCSK6-204ENST00000558154 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
PCSK6-204ENST00000558154 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
PCSK6-204ENST00000558154 SOGA1O94964 1423 aa23.28■■□□□ 1.32
PCSK6-204ENST00000558154 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
PCSK6-204ENST00000558154 RIMBP3CA6NJZ7 1639 aa23.23■■□□□ 1.31
PCSK6-204ENST00000558154 RIMBP3BA6NNM3 1639 aa23.23■■□□□ 1.31
PCSK6-204ENST00000558154 RIMBP3Q9UFD9 1639 aa23.23■■□□□ 1.31
PCSK6-204ENST00000558154 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
PCSK6-204ENST00000558154 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
PCSK6-204ENST00000558154 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
PCSK6-204ENST00000558154 FBLN2P98095 1184 aa23.13■■□□□ 1.29
PCSK6-204ENST00000558154 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
PCSK6-204ENST00000558154 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
PCSK6-204ENST00000558154 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
PCSK6-204ENST00000558154 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
PCSK6-204ENST00000558154 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
PCSK6-204ENST00000558154 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
PCSK6-204ENST00000558154 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
PCSK6-204ENST00000558154 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
PCSK6-204ENST00000558154 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
PCSK6-204ENST00000558154 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
PCSK6-204ENST00000558154 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
PCSK6-204ENST00000558154 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
PCSK6-204ENST00000558154 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
PCSK6-204ENST00000558154 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
PCSK6-204ENST00000558154 ADAMTS12P58397 1594 aa22.88■■□□□ 1.25
PCSK6-204ENST00000558154 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
PCSK6-204ENST00000558154 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
PCSK6-204ENST00000558154 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
PCSK6-204ENST00000558154 CEP170Q5SW79 1584 aa22.75■■□□□ 1.23
PCSK6-204ENST00000558154 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
PCSK6-204ENST00000558154 NUP160Q12769 1436 aa22.67■■□□□ 1.22
PCSK6-204ENST00000558154 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
PCSK6-204ENST00000558154 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
PCSK6-204ENST00000558154 CUL7Q14999 1698 aa22.58■■□□□ 1.2
PCSK6-204ENST00000558154 TRHP20396 242 aaPredicted RBP22.57■■□□□ 1.2
PCSK6-204ENST00000558154 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
PCSK6-204ENST00000558154 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
PCSK6-204ENST00000558154 PRG4Q92954 1404 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms