RNA–Protein interactions for RNA: ENST00000558109.1

AC012236.1-205, humanhuman

TSL 3

Gene AC012236.1, Length 608 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012236.1-205ENST00000558109 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
AC012236.1-205ENST00000558109 ABCC9O60706 1549 aa19.35■□□□□ 0.69
AC012236.1-205ENST00000558109 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
AC012236.1-205ENST00000558109 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
AC012236.1-205ENST00000558109 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
AC012236.1-205ENST00000558109 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
AC012236.1-205ENST00000558109 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
AC012236.1-205ENST00000558109 NACADO15069 1562 aa17.79■□□□□ 0.44
AC012236.1-205ENST00000558109 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
AC012236.1-205ENST00000558109 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
AC012236.1-205ENST00000558109 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
AC012236.1-205ENST00000558109 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
AC012236.1-205ENST00000558109 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
AC012236.1-205ENST00000558109 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
AC012236.1-205ENST00000558109 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
AC012236.1-205ENST00000558109 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
AC012236.1-205ENST00000558109 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
AC012236.1-205ENST00000558109 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
AC012236.1-205ENST00000558109 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
AC012236.1-205ENST00000558109 CUX2O14529 1486 aa16.8■□□□□ 0.28
AC012236.1-205ENST00000558109 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
AC012236.1-205ENST00000558109 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
AC012236.1-205ENST00000558109 NESP48681 1621 aa16.46■□□□□ 0.23
AC012236.1-205ENST00000558109 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
AC012236.1-205ENST00000558109 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
AC012236.1-205ENST00000558109 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
AC012236.1-205ENST00000558109 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
AC012236.1-205ENST00000558109 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
AC012236.1-205ENST00000558109 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
AC012236.1-205ENST00000558109 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
AC012236.1-205ENST00000558109 LAMC3Q9Y6N6 1575 aa16.18■□□□□ 0.18
AC012236.1-205ENST00000558109 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
AC012236.1-205ENST00000558109 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
AC012236.1-205ENST00000558109 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.16
AC012236.1-205ENST00000558109 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
AC012236.1-205ENST00000558109 WDR62O43379 1518 aa15.98■□□□□ 0.15
AC012236.1-205ENST00000558109 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
AC012236.1-205ENST00000558109 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
AC012236.1-205ENST00000558109 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
AC012236.1-205ENST00000558109 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
AC012236.1-205ENST00000558109 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
AC012236.1-205ENST00000558109 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
AC012236.1-205ENST00000558109 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
AC012236.1-205ENST00000558109 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
AC012236.1-205ENST00000558109 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
AC012236.1-205ENST00000558109 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
AC012236.1-205ENST00000558109 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
AC012236.1-205ENST00000558109 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
AC012236.1-205ENST00000558109 WIZO95785 1651 aa15.75■□□□□ 0.11
AC012236.1-205ENST00000558109 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
AC012236.1-205ENST00000558109 CYB5RLQ6IPT4 315 aa15.68■□□□□ 0.1
AC012236.1-205ENST00000558109 CHD1O14646 1710 aa15.62■□□□□ 0.09
AC012236.1-205ENST00000558109 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
AC012236.1-205ENST00000558109 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
AC012236.1-205ENST00000558109 CFTRP13569 1480 aa15.58■□□□□ 0.08
AC012236.1-205ENST00000558109 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
AC012236.1-205ENST00000558109 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
AC012236.1-205ENST00000558109 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
AC012236.1-205ENST00000558109 FBLN2P98095 1184 aa15.47■□□□□ 0.07
AC012236.1-205ENST00000558109 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
AC012236.1-205ENST00000558109 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
AC012236.1-205ENST00000558109 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.05
AC012236.1-205ENST00000558109 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
AC012236.1-205ENST00000558109 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
AC012236.1-205ENST00000558109 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
AC012236.1-205ENST00000558109 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
AC012236.1-205ENST00000558109 CLASP1Q7Z460 1538 aa15.26■□□□□ 0.03
AC012236.1-205ENST00000558109 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
AC012236.1-205ENST00000558109 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
AC012236.1-205ENST00000558109 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
AC012236.1-205ENST00000558109 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
AC012236.1-205ENST00000558109 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
AC012236.1-205ENST00000558109 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
AC012236.1-205ENST00000558109 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
AC012236.1-205ENST00000558109 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
AC012236.1-205ENST00000558109 SOGA1O94964 1423 aa15.12■□□□□ 0.01
AC012236.1-205ENST00000558109 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
AC012236.1-205ENST00000558109 KIF13AQ9H1H9 1805 aa15.1■□□□□ 0.01
AC012236.1-205ENST00000558109 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0.01
AC012236.1-205ENST00000558109 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
AC012236.1-205ENST00000558109 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
AC012236.1-205ENST00000558109 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
AC012236.1-205ENST00000558109 SYNJ2O15056 1496 aa15.06■□□□□ 0
AC012236.1-205ENST00000558109 WDR97A6NE52 1622 aa15.06■□□□□ 0
AC012236.1-205ENST00000558109 GRIN2BQ13224 1484 aa15.05■□□□□ -0
AC012236.1-205ENST00000558109 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
AC012236.1-205ENST00000558109 CUX1P39880 1505 aa14.96□□□□□ -0.02
AC012236.1-205ENST00000558109 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
AC012236.1-205ENST00000558109 TSPOAP1O95153 1857 aa14.94□□□□□ -0.02
AC012236.1-205ENST00000558109 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
AC012236.1-205ENST00000558109 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
AC012236.1-205ENST00000558109 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
AC012236.1-205ENST00000558109 KDM6BO15054 1643 aa14.88□□□□□ -0.03
AC012236.1-205ENST00000558109 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
AC012236.1-205ENST00000558109 ADAMTS12P58397 1594 aa14.85□□□□□ -0.03
AC012236.1-205ENST00000558109 FAM69CQ0P6D2 419 aa14.84□□□□□ -0.03
AC012236.1-205ENST00000558109 DIP2BQ9P265 1576 aa14.81□□□□□ -0.04
AC012236.1-205ENST00000558109 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
AC012236.1-205ENST00000558109 ABCC10Q5T3U5 1492 aa14.78□□□□□ -0.04
AC012236.1-205ENST00000558109 NUP160Q12769 1436 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms