RNA–Protein interactions for RNA: ENST00000558056.1

TNFAIP2-202, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-202ENST00000558056 NISCHQ9Y2I1 1504 aa40.47■■■■■ 4.07
TNFAIP2-202ENST00000558056 CCDC180Q9P1Z9 1646 aa36.15■■■■□ 3.38
TNFAIP2-202ENST00000558056 ABCC9O60706 1549 aa35.78■■■■□ 3.32
TNFAIP2-202ENST00000558056 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
TNFAIP2-202ENST00000558056 DCAF8L2P0C7V8 631 aa34.09■■■■□ 3.05
TNFAIP2-202ENST00000558056 NACADO15069 1562 aa34.05■■■■□ 3.04
TNFAIP2-202ENST00000558056 MYO15BQ96JP2 1530 aa33.66■■■□□ 2.98
TNFAIP2-202ENST00000558056 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
TNFAIP2-202ENST00000558056 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
TNFAIP2-202ENST00000558056 DCAF1Q9Y4B6 1507 aa33.4■■■□□ 2.94
TNFAIP2-202ENST00000558056 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
TNFAIP2-202ENST00000558056 BICRAQ9NZM4 1560 aa33.16■■■□□ 2.9
TNFAIP2-202ENST00000558056 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
TNFAIP2-202ENST00000558056 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
TNFAIP2-202ENST00000558056 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
TNFAIP2-202ENST00000558056 EIF4G1Q04637 1599 aaKnown RBP32.34■■■□□ 2.77
TNFAIP2-202ENST00000558056 CC2D2AQ9P2K1 1620 aa32.32■■■□□ 2.76
TNFAIP2-202ENST00000558056 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
TNFAIP2-202ENST00000558056 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
TNFAIP2-202ENST00000558056 BAZ1AQ9NRL2 1556 aaPredicted RBP31.4■■■□□ 2.62
TNFAIP2-202ENST00000558056 NCAPD3P42695 1498 aa31.4■■■□□ 2.62
TNFAIP2-202ENST00000558056 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
TNFAIP2-202ENST00000558056 SMARCA2P51531 1590 aa31.35■■■□□ 2.61
TNFAIP2-202ENST00000558056 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
TNFAIP2-202ENST00000558056 MROH2BQ7Z745 1585 aa31.21■■■□□ 2.59
TNFAIP2-202ENST00000558056 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
TNFAIP2-202ENST00000558056 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
TNFAIP2-202ENST00000558056 WIZO95785 1651 aa30.89■■■□□ 2.54
TNFAIP2-202ENST00000558056 ERCC6Q03468 1493 aa30.89■■■□□ 2.53
TNFAIP2-202ENST00000558056 NESP48681 1621 aa30.84■■■□□ 2.53
TNFAIP2-202ENST00000558056 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
TNFAIP2-202ENST00000558056 LAMC3Q9Y6N6 1575 aa30.67■■■□□ 2.5
TNFAIP2-202ENST00000558056 CUX2O14529 1486 aa30.6■■■□□ 2.49
TNFAIP2-202ENST00000558056 KIF21AQ7Z4S6 1674 aa30.5■■■□□ 2.47
TNFAIP2-202ENST00000558056 TOP2AP11388 1531 aaKnown RBP30.5■■■□□ 2.47
TNFAIP2-202ENST00000558056 CADPSQ9ULU8 1353 aa30.49■■■□□ 2.47
TNFAIP2-202ENST00000558056 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
TNFAIP2-202ENST00000558056 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
TNFAIP2-202ENST00000558056 CFTRP13569 1480 aa30.22■■■□□ 2.43
TNFAIP2-202ENST00000558056 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
TNFAIP2-202ENST00000558056 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
TNFAIP2-202ENST00000558056 FANCD2Q9BXW9 1451 aa30.18■■■□□ 2.42
TNFAIP2-202ENST00000558056 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
TNFAIP2-202ENST00000558056 WDR62O43379 1518 aa30.09■■■□□ 2.41
TNFAIP2-202ENST00000558056 DNAJC5Q9H3Z4 198 aa30.08■■■□□ 2.41
TNFAIP2-202ENST00000558056 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
TNFAIP2-202ENST00000558056 URB2Q14146 1524 aaKnown RBP29.89■■■□□ 2.38
TNFAIP2-202ENST00000558056 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
TNFAIP2-202ENST00000558056 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
TNFAIP2-202ENST00000558056 ABCC8Q09428 1581 aa29.6■■■□□ 2.33
TNFAIP2-202ENST00000558056 DNMBPQ6XZF7 1577 aa29.59■■■□□ 2.33
TNFAIP2-202ENST00000558056 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
TNFAIP2-202ENST00000558056 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
TNFAIP2-202ENST00000558056 POLA1P09884 1462 aaPredicted RBP29.37■■■□□ 2.29
TNFAIP2-202ENST00000558056 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
TNFAIP2-202ENST00000558056 TARBP1Q13395 1621 aaKnown RBP29.34■■■□□ 2.29
TNFAIP2-202ENST00000558056 CUX1P39880 1505 aa29.3■■■□□ 2.28
TNFAIP2-202ENST00000558056 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
TNFAIP2-202ENST00000558056 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
TNFAIP2-202ENST00000558056 FGD5Q6ZNL6 1462 aa29.27■■■□□ 2.28
TNFAIP2-202ENST00000558056 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.272e-8■■□□□ 14.3
TNFAIP2-202ENST00000558056 SOGA1O94964 1423 aa29.25■■■□□ 2.27
TNFAIP2-202ENST00000558056 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
TNFAIP2-202ENST00000558056 CHD1O14646 1710 aa29.09■■■□□ 2.25
TNFAIP2-202ENST00000558056 WDR97A6NE52 1622 aa29.06■■■□□ 2.24
TNFAIP2-202ENST00000558056 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
TNFAIP2-202ENST00000558056 FBLN2P98095 1184 aa29.05■■■□□ 2.24
TNFAIP2-202ENST00000558056 SNAPC4Q5SXM2 1469 aa28.98■■■□□ 2.23
TNFAIP2-202ENST00000558056 WRNQ14191 1432 aaPredicted RBP eCLIP28.97■■■□□ 2.23
TNFAIP2-202ENST00000558056 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
TNFAIP2-202ENST00000558056 GRIN2BQ13224 1484 aa28.95■■■□□ 2.22
TNFAIP2-202ENST00000558056 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
TNFAIP2-202ENST00000558056 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
TNFAIP2-202ENST00000558056 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
TNFAIP2-202ENST00000558056 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
TNFAIP2-202ENST00000558056 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
TNFAIP2-202ENST00000558056 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
TNFAIP2-202ENST00000558056 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
TNFAIP2-202ENST00000558056 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
TNFAIP2-202ENST00000558056 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
TNFAIP2-202ENST00000558056 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
TNFAIP2-202ENST00000558056 CHMP7Q8WUX9 453 aaPredicted RBP28.86■■■□□ 2.21
TNFAIP2-202ENST00000558056 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
TNFAIP2-202ENST00000558056 SYNJ2O15056 1496 aa28.79■■■□□ 2.2
TNFAIP2-202ENST00000558056 CLASP1Q7Z460 1538 aa28.68■■■□□ 2.18
TNFAIP2-202ENST00000558056 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
TNFAIP2-202ENST00000558056 CYB5RLQ6IPT4 315 aa28.62■■■□□ 2.17
TNFAIP2-202ENST00000558056 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
TNFAIP2-202ENST00000558056 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
TNFAIP2-202ENST00000558056 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
TNFAIP2-202ENST00000558056 FHAD1B1AJZ9 1412 aa28.54■■■□□ 2.16
TNFAIP2-202ENST00000558056 CEP170Q5SW79 1584 aa28.47■■■□□ 2.15
TNFAIP2-202ENST00000558056 NUP160Q12769 1436 aa28.43■■■□□ 2.14
TNFAIP2-202ENST00000558056 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
TNFAIP2-202ENST00000558056 ERCC6L2Q5T890 1561 aa28.3■■■□□ 2.12
TNFAIP2-202ENST00000558056 IGF1RP08069 1367 aa28.29■■■□□ 2.12
TNFAIP2-202ENST00000558056 CUL7Q14999 1698 aa28.29■■■□□ 2.12
TNFAIP2-202ENST00000558056 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
TNFAIP2-202ENST00000558056 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
TNFAIP2-202ENST00000558056 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms