RNA–Protein interactions for RNA: ENST00000557999.5

AP3S2-203, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-203ENST00000557999 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
AP3S2-203ENST00000557999 ABCC9O60706 1549 aa19.06■□□□□ 0.64
AP3S2-203ENST00000557999 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
AP3S2-203ENST00000557999 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
AP3S2-203ENST00000557999 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
AP3S2-203ENST00000557999 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
AP3S2-203ENST00000557999 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
AP3S2-203ENST00000557999 NACADO15069 1562 aa17.86■□□□□ 0.45
AP3S2-203ENST00000557999 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
AP3S2-203ENST00000557999 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
AP3S2-203ENST00000557999 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
AP3S2-203ENST00000557999 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
AP3S2-203ENST00000557999 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
AP3S2-203ENST00000557999 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
AP3S2-203ENST00000557999 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
AP3S2-203ENST00000557999 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
AP3S2-203ENST00000557999 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
AP3S2-203ENST00000557999 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
AP3S2-203ENST00000557999 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
AP3S2-203ENST00000557999 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
AP3S2-203ENST00000557999 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
AP3S2-203ENST00000557999 CUX2O14529 1486 aa16.56■□□□□ 0.24
AP3S2-203ENST00000557999 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
AP3S2-203ENST00000557999 NCAPD3P42695 1498 aa16.49■□□□□ 0.23
AP3S2-203ENST00000557999 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
AP3S2-203ENST00000557999 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
AP3S2-203ENST00000557999 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
AP3S2-203ENST00000557999 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
AP3S2-203ENST00000557999 NESP48681 1621 aa16.28■□□□□ 0.2
AP3S2-203ENST00000557999 BAZ1BQ9UIG0 1483 aaKnown RBP16.26■□□□□ 0.19
AP3S2-203ENST00000557999 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
AP3S2-203ENST00000557999 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
AP3S2-203ENST00000557999 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
AP3S2-203ENST00000557999 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
AP3S2-203ENST00000557999 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
AP3S2-203ENST00000557999 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
AP3S2-203ENST00000557999 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.15
AP3S2-203ENST00000557999 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
AP3S2-203ENST00000557999 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
AP3S2-203ENST00000557999 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
AP3S2-203ENST00000557999 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
AP3S2-203ENST00000557999 WDR62O43379 1518 aa15.92■□□□□ 0.14
AP3S2-203ENST00000557999 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
AP3S2-203ENST00000557999 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
AP3S2-203ENST00000557999 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
AP3S2-203ENST00000557999 WIZO95785 1651 aa15.81■□□□□ 0.12
AP3S2-203ENST00000557999 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
AP3S2-203ENST00000557999 CFTRP13569 1480 aa15.76■□□□□ 0.11
AP3S2-203ENST00000557999 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
AP3S2-203ENST00000557999 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
AP3S2-203ENST00000557999 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
AP3S2-203ENST00000557999 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
AP3S2-203ENST00000557999 RIMBP3CA6NJZ7 1639 aa15.53■□□□□ 0.08
AP3S2-203ENST00000557999 RIMBP3BA6NNM3 1639 aa15.53■□□□□ 0.08
AP3S2-203ENST00000557999 RIMBP3Q9UFD9 1639 aa15.53■□□□□ 0.08
AP3S2-203ENST00000557999 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
AP3S2-203ENST00000557999 ARHGEF11O15085 1522 aa15.49■□□□□ 0.07
AP3S2-203ENST00000557999 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
AP3S2-203ENST00000557999 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
AP3S2-203ENST00000557999 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
AP3S2-203ENST00000557999 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
AP3S2-203ENST00000557999 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
AP3S2-203ENST00000557999 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
AP3S2-203ENST00000557999 CYB5RLQ6IPT4 315 aa15.39■□□□□ 0.05
AP3S2-203ENST00000557999 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.05
AP3S2-203ENST00000557999 FBLN2P98095 1184 aa15.34■□□□□ 0.05
AP3S2-203ENST00000557999 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
AP3S2-203ENST00000557999 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
AP3S2-203ENST00000557999 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
AP3S2-203ENST00000557999 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
AP3S2-203ENST00000557999 CHD1O14646 1710 aa15.29■□□□□ 0.04
AP3S2-203ENST00000557999 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
AP3S2-203ENST00000557999 SOGA1O94964 1423 aa15.24■□□□□ 0.03
AP3S2-203ENST00000557999 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
AP3S2-203ENST00000557999 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
AP3S2-203ENST00000557999 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
AP3S2-203ENST00000557999 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
AP3S2-203ENST00000557999 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
AP3S2-203ENST00000557999 FGD5Q6ZNL6 1462 aa15.17■□□□□ 0.02
AP3S2-203ENST00000557999 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
AP3S2-203ENST00000557999 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
AP3S2-203ENST00000557999 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
AP3S2-203ENST00000557999 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
AP3S2-203ENST00000557999 CUX1P39880 1505 aa15.11■□□□□ 0.01
AP3S2-203ENST00000557999 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
AP3S2-203ENST00000557999 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
AP3S2-203ENST00000557999 PBRM1Q86U86 1689 aa14.99□□□□□ -0.01
AP3S2-203ENST00000557999 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
AP3S2-203ENST00000557999 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
AP3S2-203ENST00000557999 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
AP3S2-203ENST00000557999 NUP160Q12769 1436 aa14.9□□□□□ -0.02
AP3S2-203ENST00000557999 FOXD1Q16676 465 aa14.89□□□□□ -0.03
AP3S2-203ENST00000557999 ADAMTS12P58397 1594 aa14.89□□□□□ -0.03
AP3S2-203ENST00000557999 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
AP3S2-203ENST00000557999 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
AP3S2-203ENST00000557999 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
AP3S2-203ENST00000557999 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
AP3S2-203ENST00000557999 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
AP3S2-203ENST00000557999 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
AP3S2-203ENST00000557999 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms