RNA–Protein interactions for RNA: ENST00000557953.1

AC007907.1-201, humanhuman

TSL 3 BASIC

Gene AC007907.1, Length 451 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007907.1-201ENST00000557953 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
AC007907.1-201ENST00000557953 ABCC9O60706 1549 aa20.69■□□□□ 0.9
AC007907.1-201ENST00000557953 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
AC007907.1-201ENST00000557953 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
AC007907.1-201ENST00000557953 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
AC007907.1-201ENST00000557953 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
AC007907.1-201ENST00000557953 NACADO15069 1562 aa19.4■□□□□ 0.7
AC007907.1-201ENST00000557953 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
AC007907.1-201ENST00000557953 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
AC007907.1-201ENST00000557953 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
AC007907.1-201ENST00000557953 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
AC007907.1-201ENST00000557953 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
AC007907.1-201ENST00000557953 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
AC007907.1-201ENST00000557953 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
AC007907.1-201ENST00000557953 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
AC007907.1-201ENST00000557953 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.56
AC007907.1-201ENST00000557953 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
AC007907.1-201ENST00000557953 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
AC007907.1-201ENST00000557953 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
AC007907.1-201ENST00000557953 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
AC007907.1-201ENST00000557953 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
AC007907.1-201ENST00000557953 NESP48681 1621 aa17.82■□□□□ 0.44
AC007907.1-201ENST00000557953 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
AC007907.1-201ENST00000557953 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
AC007907.1-201ENST00000557953 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
AC007907.1-201ENST00000557953 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
AC007907.1-201ENST00000557953 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
AC007907.1-201ENST00000557953 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
AC007907.1-201ENST00000557953 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
AC007907.1-201ENST00000557953 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
AC007907.1-201ENST00000557953 CUX2O14529 1486 aa17.64■□□□□ 0.41
AC007907.1-201ENST00000557953 WIZO95785 1651 aa17.61■□□□□ 0.41
AC007907.1-201ENST00000557953 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
AC007907.1-201ENST00000557953 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
AC007907.1-201ENST00000557953 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
AC007907.1-201ENST00000557953 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
AC007907.1-201ENST00000557953 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
AC007907.1-201ENST00000557953 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
AC007907.1-201ENST00000557953 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
AC007907.1-201ENST00000557953 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
AC007907.1-201ENST00000557953 WDR62O43379 1518 aa17.26■□□□□ 0.35
AC007907.1-201ENST00000557953 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
AC007907.1-201ENST00000557953 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
AC007907.1-201ENST00000557953 CFTRP13569 1480 aa17.21■□□□□ 0.35
AC007907.1-201ENST00000557953 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
AC007907.1-201ENST00000557953 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
AC007907.1-201ENST00000557953 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
AC007907.1-201ENST00000557953 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
AC007907.1-201ENST00000557953 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
AC007907.1-201ENST00000557953 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
AC007907.1-201ENST00000557953 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
AC007907.1-201ENST00000557953 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
AC007907.1-201ENST00000557953 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
AC007907.1-201ENST00000557953 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
AC007907.1-201ENST00000557953 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC007907.1-201ENST00000557953 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
AC007907.1-201ENST00000557953 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
AC007907.1-201ENST00000557953 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.27
AC007907.1-201ENST00000557953 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.27
AC007907.1-201ENST00000557953 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.27
AC007907.1-201ENST00000557953 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
AC007907.1-201ENST00000557953 CHD1O14646 1710 aa16.76■□□□□ 0.27
AC007907.1-201ENST00000557953 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
AC007907.1-201ENST00000557953 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
AC007907.1-201ENST00000557953 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
AC007907.1-201ENST00000557953 CUX1P39880 1505 aa16.7■□□□□ 0.26
AC007907.1-201ENST00000557953 FBLN2P98095 1184 aa16.69■□□□□ 0.26
AC007907.1-201ENST00000557953 SOGA1O94964 1423 aa16.68■□□□□ 0.26
AC007907.1-201ENST00000557953 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
AC007907.1-201ENST00000557953 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
AC007907.1-201ENST00000557953 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
AC007907.1-201ENST00000557953 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
AC007907.1-201ENST00000557953 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
AC007907.1-201ENST00000557953 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
AC007907.1-201ENST00000557953 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
AC007907.1-201ENST00000557953 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
AC007907.1-201ENST00000557953 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
AC007907.1-201ENST00000557953 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
AC007907.1-201ENST00000557953 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
AC007907.1-201ENST00000557953 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
AC007907.1-201ENST00000557953 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
AC007907.1-201ENST00000557953 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
AC007907.1-201ENST00000557953 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
AC007907.1-201ENST00000557953 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
AC007907.1-201ENST00000557953 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
AC007907.1-201ENST00000557953 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
AC007907.1-201ENST00000557953 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
AC007907.1-201ENST00000557953 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
AC007907.1-201ENST00000557953 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
AC007907.1-201ENST00000557953 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
AC007907.1-201ENST00000557953 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
AC007907.1-201ENST00000557953 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
AC007907.1-201ENST00000557953 NUP160Q12769 1436 aa16.22■□□□□ 0.19
AC007907.1-201ENST00000557953 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
AC007907.1-201ENST00000557953 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
AC007907.1-201ENST00000557953 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
AC007907.1-201ENST00000557953 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
AC007907.1-201ENST00000557953 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
AC007907.1-201ENST00000557953 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
AC007907.1-201ENST00000557953 IGF1RP08069 1367 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms