RNA–Protein interactions for RNA: ENST00000557862.1

AC009997.1-201, humanhuman

BASIC

Gene AC009997.1, Length 129 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009997.1-201ENST00000557862 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
AC009997.1-201ENST00000557862 ABCC9O60706 1549 aa18.89■□□□□ 0.61
AC009997.1-201ENST00000557862 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
AC009997.1-201ENST00000557862 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
AC009997.1-201ENST00000557862 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
AC009997.1-201ENST00000557862 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
AC009997.1-201ENST00000557862 NACADO15069 1562 aa17.74■□□□□ 0.43
AC009997.1-201ENST00000557862 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
AC009997.1-201ENST00000557862 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
AC009997.1-201ENST00000557862 UNC13AQ9UPW8 1703 aa17.4■□□□□ 0.38
AC009997.1-201ENST00000557862 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
AC009997.1-201ENST00000557862 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
AC009997.1-201ENST00000557862 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
AC009997.1-201ENST00000557862 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
AC009997.1-201ENST00000557862 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
AC009997.1-201ENST00000557862 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
AC009997.1-201ENST00000557862 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
AC009997.1-201ENST00000557862 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
AC009997.1-201ENST00000557862 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
AC009997.1-201ENST00000557862 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
AC009997.1-201ENST00000557862 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
AC009997.1-201ENST00000557862 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
AC009997.1-201ENST00000557862 CUX2O14529 1486 aa16.28■□□□□ 0.2
AC009997.1-201ENST00000557862 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
AC009997.1-201ENST00000557862 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
AC009997.1-201ENST00000557862 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
AC009997.1-201ENST00000557862 BAZ1AQ9NRL2 1556 aaPredicted RBP16.18■□□□□ 0.18
AC009997.1-201ENST00000557862 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
AC009997.1-201ENST00000557862 NESP48681 1621 aa16.18■□□□□ 0.18
AC009997.1-201ENST00000557862 PEG3Q9GZU2 1588 aa16.08■□□□□ 0.16
AC009997.1-201ENST00000557862 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
AC009997.1-201ENST00000557862 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
AC009997.1-201ENST00000557862 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
AC009997.1-201ENST00000557862 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.14
AC009997.1-201ENST00000557862 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
AC009997.1-201ENST00000557862 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
AC009997.1-201ENST00000557862 WIZO95785 1651 aa15.86■□□□□ 0.13
AC009997.1-201ENST00000557862 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
AC009997.1-201ENST00000557862 WDR62O43379 1518 aa15.75■□□□□ 0.11
AC009997.1-201ENST00000557862 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
AC009997.1-201ENST00000557862 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
AC009997.1-201ENST00000557862 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
AC009997.1-201ENST00000557862 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
AC009997.1-201ENST00000557862 CFTRP13569 1480 aa15.7■□□□□ 0.1
AC009997.1-201ENST00000557862 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
AC009997.1-201ENST00000557862 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
AC009997.1-201ENST00000557862 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.09
AC009997.1-201ENST00000557862 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
AC009997.1-201ENST00000557862 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
AC009997.1-201ENST00000557862 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
AC009997.1-201ENST00000557862 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
AC009997.1-201ENST00000557862 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
AC009997.1-201ENST00000557862 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
AC009997.1-201ENST00000557862 FBLN2P98095 1184 aa15.32■□□□□ 0.04
AC009997.1-201ENST00000557862 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
AC009997.1-201ENST00000557862 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
AC009997.1-201ENST00000557862 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
AC009997.1-201ENST00000557862 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
AC009997.1-201ENST00000557862 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
AC009997.1-201ENST00000557862 CYB5RLQ6IPT4 315 aa15.29■□□□□ 0.04
AC009997.1-201ENST00000557862 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
AC009997.1-201ENST00000557862 ARHGEF11O15085 1522 aa15.27■□□□□ 0.04
AC009997.1-201ENST00000557862 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
AC009997.1-201ENST00000557862 SOGA1O94964 1423 aa15.24■□□□□ 0.03
AC009997.1-201ENST00000557862 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
AC009997.1-201ENST00000557862 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
AC009997.1-201ENST00000557862 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
AC009997.1-201ENST00000557862 CHD1O14646 1710 aa15.17■□□□□ 0.02
AC009997.1-201ENST00000557862 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
AC009997.1-201ENST00000557862 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
AC009997.1-201ENST00000557862 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
AC009997.1-201ENST00000557862 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
AC009997.1-201ENST00000557862 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
AC009997.1-201ENST00000557862 CUX1P39880 1505 aa15.1■□□□□ 0.01
AC009997.1-201ENST00000557862 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
AC009997.1-201ENST00000557862 GRIN2BQ13224 1484 aa15.08■□□□□ 0
AC009997.1-201ENST00000557862 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
AC009997.1-201ENST00000557862 WDR97A6NE52 1622 aa15.06■□□□□ 0
AC009997.1-201ENST00000557862 SYNJ1O43426 1573 aa15.02■□□□□ -0
AC009997.1-201ENST00000557862 SYNJ2O15056 1496 aa15.02■□□□□ -0
AC009997.1-201ENST00000557862 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
AC009997.1-201ENST00000557862 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
AC009997.1-201ENST00000557862 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.02
AC009997.1-201ENST00000557862 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
AC009997.1-201ENST00000557862 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
AC009997.1-201ENST00000557862 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
AC009997.1-201ENST00000557862 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
AC009997.1-201ENST00000557862 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
AC009997.1-201ENST00000557862 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
AC009997.1-201ENST00000557862 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
AC009997.1-201ENST00000557862 NUP160Q12769 1436 aa14.81□□□□□ -0.04
AC009997.1-201ENST00000557862 ADAMTS12P58397 1594 aa14.8□□□□□ -0.04
AC009997.1-201ENST00000557862 ERCC6L2Q5T890 1561 aa14.8□□□□□ -0.04
AC009997.1-201ENST00000557862 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
AC009997.1-201ENST00000557862 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
AC009997.1-201ENST00000557862 JPH4Q96JJ6 628 aa14.77□□□□□ -0.05
AC009997.1-201ENST00000557862 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
AC009997.1-201ENST00000557862 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
AC009997.1-201ENST00000557862 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
AC009997.1-201ENST00000557862 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms