RNA–Protein interactions for RNA: ENST00000557704.5

DPF3-214, Transcript of double PHD fingers 3, humanhuman

TSL 2

Gene DPF3, Length 3,755 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPF3-214ENST00000557704 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.71
DPF3-214ENST00000557704 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
DPF3-214ENST00000557704 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
DPF3-214ENST00000557704 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
DPF3-214ENST00000557704 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
DPF3-214ENST00000557704 HRCP23327 699 aa17.51■□□□□ 0.39
DPF3-214ENST00000557704 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.38
DPF3-214ENST00000557704 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
DPF3-214ENST00000557704 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
DPF3-214ENST00000557704 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
DPF3-214ENST00000557704 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
DPF3-214ENST00000557704 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
DPF3-214ENST00000557704 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.29
DPF3-214ENST00000557704 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
DPF3-214ENST00000557704 AEBP2Q6ZN18 517 aaPredicted RBP16.81■□□□□ 0.28
DPF3-214ENST00000557704 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
DPF3-214ENST00000557704 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
DPF3-214ENST00000557704 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
DPF3-214ENST00000557704 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.26
DPF3-214ENST00000557704 CENPBP07199 599 aaPredicted RBP16.52■□□□□ 0.23
DPF3-214ENST00000557704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
DPF3-214ENST00000557704 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
DPF3-214ENST00000557704 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
DPF3-214ENST00000557704 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
DPF3-214ENST00000557704 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
DPF3-214ENST00000557704 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
DPF3-214ENST00000557704 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
DPF3-214ENST00000557704 ACIN1Q9UKV3 1341 aaKnown RBP16.24■□□□□ 0.19
DPF3-214ENST00000557704 NEUROD1Q13562 356 aa16.21■□□□□ 0.18
DPF3-214ENST00000557704 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
DPF3-214ENST00000557704 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
DPF3-214ENST00000557704 MYT1Q01538 1121 aa16.14■□□□□ 0.18
DPF3-214ENST00000557704 APLP2Q06481 763 aa16.1■□□□□ 0.17
DPF3-214ENST00000557704 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
DPF3-214ENST00000557704 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
DPF3-214ENST00000557704 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
DPF3-214ENST00000557704 ABCC9O60706 1549 aa15.84■□□□□ 0.13
DPF3-214ENST00000557704 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
DPF3-214ENST00000557704 SCRIBQ14160 1630 aa15.77■□□□□ 0.11
DPF3-214ENST00000557704 MIER1Q8N108 512 aa15.76■□□□□ 0.11
DPF3-214ENST00000557704 ITGAEP38570 1179 aa15.72■□□□□ 0.11
DPF3-214ENST00000557704 BCANQ96GW7 911 aa15.65■□□□□ 0.1
DPF3-214ENST00000557704 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
DPF3-214ENST00000557704 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
DPF3-214ENST00000557704 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
DPF3-214ENST00000557704 NEFLP07196 543 aa15.58■□□□□ 0.09
DPF3-214ENST00000557704 ATP1B4Q9UN42 357 aaPredicted RBP15.55■□□□□ 0.08
DPF3-214ENST00000557704 ERICH6Q7L0X2 663 aa15.51■□□□□ 0.07
DPF3-214ENST00000557704 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
DPF3-214ENST00000557704 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
DPF3-214ENST00000557704 FKBP8Q14318 412 aa15.36■□□□□ 0.05
DPF3-214ENST00000557704 SOGA1O94964 1423 aa15.34■□□□□ 0.05
DPF3-214ENST00000557704 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
DPF3-214ENST00000557704 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
DPF3-214ENST00000557704 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
DPF3-214ENST00000557704 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
DPF3-214ENST00000557704 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
DPF3-214ENST00000557704 ABCC8Q09428 1581 aa15.27■□□□□ 0.04
DPF3-214ENST00000557704 FAM50AQ14320 339 aaKnown RBP15.27■□□□□ 0.03
DPF3-214ENST00000557704 CLIP1P30622 1438 aa15.26■□□□□ 0.03
DPF3-214ENST00000557704 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
DPF3-214ENST00000557704 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
DPF3-214ENST00000557704 HIRIP3Q9BW71 556 aaPredicted RBP15.24■□□□□ 0.03
DPF3-214ENST00000557704 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
DPF3-214ENST00000557704 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
DPF3-214ENST00000557704 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
DPF3-214ENST00000557704 WIZO95785 1651 aa15.19■□□□□ 0.02
DPF3-214ENST00000557704 ANP32CO43423 234 aa15.19■□□□□ 0.02
DPF3-214ENST00000557704 TSHZ2Q9NRE2 1034 aa15.16■□□□□ 0.02
DPF3-214ENST00000557704 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
DPF3-214ENST00000557704 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
DPF3-214ENST00000557704 EEA1Q15075 1411 aa15.12■□□□□ 0.01
DPF3-214ENST00000557704 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
DPF3-214ENST00000557704 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
DPF3-214ENST00000557704 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
DPF3-214ENST00000557704 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
DPF3-214ENST00000557704 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
DPF3-214ENST00000557704 BCL11AQ9H165 835 aa15.06■□□□□ 0
DPF3-214ENST00000557704 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
DPF3-214ENST00000557704 KANK4Q5T7N3 995 aaPredicted RBP15.03■□□□□ -0
DPF3-214ENST00000557704 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
DPF3-214ENST00000557704 SIN3AQ96ST3 1273 aa15.03■□□□□ -0
DPF3-214ENST00000557704 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
DPF3-214ENST00000557704 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
DPF3-214ENST00000557704 RBM19Q9Y4C8 960 aaKnown RBP14.98□□□□□ -0.01
DPF3-214ENST00000557704 NACADO15069 1562 aa14.97□□□□□ -0.01
DPF3-214ENST00000557704 DHX57Q6P158 1386 aaKnown RBP14.93□□□□□ -0.02
DPF3-214ENST00000557704 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
DPF3-214ENST00000557704 FAM9BQ8IZU0 186 aa14.89□□□□□ -0.03
DPF3-214ENST00000557704 NBR1Q14596 966 aa14.88□□□□□ -0.03
DPF3-214ENST00000557704 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
DPF3-214ENST00000557704 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
DPF3-214ENST00000557704 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
DPF3-214ENST00000557704 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
DPF3-214ENST00000557704 SENP3-EIF4A1A0A087X0R7 540 aa14.82□□□□□ -0.04
DPF3-214ENST00000557704 RAB3GAP2Q9H2M9 1393 aa14.8□□□□□ -0.04
DPF3-214ENST00000557704 ZNF326Q5BKZ1 582 aaKnown RBP14.78□□□□□ -0.04
DPF3-214ENST00000557704 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
DPF3-214ENST00000557704 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
DPF3-214ENST00000557704 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms