RNA–Protein interactions for RNA: ENST00000557087.5

PSMA3-211, Transcript of proteasome subunit alpha 3, humanhuman

TSL 3

Gene PSMA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-211ENST00000557087 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
PSMA3-211ENST00000557087 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
PSMA3-211ENST00000557087 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
PSMA3-211ENST00000557087 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
PSMA3-211ENST00000557087 FOXD1Q16676 465 aa22.61■■□□□ 1.21
PSMA3-211ENST00000557087 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
PSMA3-211ENST00000557087 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
PSMA3-211ENST00000557087 ADRA2BP18089 450 aa21.16■□□□□ 0.98
PSMA3-211ENST00000557087 PIAS4Q8N2W9 510 aaPredicted RBP21.05■□□□□ 0.96
PSMA3-211ENST00000557087 MSH5O43196 834 aa20.97■□□□□ 0.95
PSMA3-211ENST00000557087 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
PSMA3-211ENST00000557087 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
PSMA3-211ENST00000557087 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
PSMA3-211ENST00000557087 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
PSMA3-211ENST00000557087 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
PSMA3-211ENST00000557087 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
PSMA3-211ENST00000557087 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
PSMA3-211ENST00000557087 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
PSMA3-211ENST00000557087 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.52
PSMA3-211ENST00000557087 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
PSMA3-211ENST00000557087 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
PSMA3-211ENST00000557087 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
PSMA3-211ENST00000557087 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
PSMA3-211ENST00000557087 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
PSMA3-211ENST00000557087 KCNA4P22459 653 aa17.79■□□□□ 0.44
PSMA3-211ENST00000557087 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
PSMA3-211ENST00000557087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.41
PSMA3-211ENST00000557087 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
PSMA3-211ENST00000557087 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
PSMA3-211ENST00000557087 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
PSMA3-211ENST00000557087 CAPN15O75808 1086 aa16.93■□□□□ 0.3
PSMA3-211ENST00000557087 DSG3P32926 999 aa16.9■□□□□ 0.3
PSMA3-211ENST00000557087 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
PSMA3-211ENST00000557087 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
PSMA3-211ENST00000557087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
PSMA3-211ENST00000557087 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
PSMA3-211ENST00000557087 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
PSMA3-211ENST00000557087 ABCB7O75027 752 aa16.6■□□□□ 0.25
PSMA3-211ENST00000557087 APLP2Q06481 763 aa16.6■□□□□ 0.25
PSMA3-211ENST00000557087 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
PSMA3-211ENST00000557087 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
PSMA3-211ENST00000557087 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
PSMA3-211ENST00000557087 ZBTB22O15209 634 aa16.43■□□□□ 0.22
PSMA3-211ENST00000557087 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
PSMA3-211ENST00000557087 POLA2Q14181 598 aa16.3■□□□□ 0.2
PSMA3-211ENST00000557087 POTEHQ6S545 545 aa16.02■□□□□ 0.16
PSMA3-211ENST00000557087 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
PSMA3-211ENST00000557087 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
PSMA3-211ENST00000557087 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
PSMA3-211ENST00000557087 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
PSMA3-211ENST00000557087 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
PSMA3-211ENST00000557087 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
PSMA3-211ENST00000557087 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
PSMA3-211ENST00000557087 MKRN4PQ13434 485 aaPredicted RBP15.61■□□□□ 0.09
PSMA3-211ENST00000557087 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
PSMA3-211ENST00000557087 FBLN2P98095 1184 aa15.5■□□□□ 0.07
PSMA3-211ENST00000557087 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
PSMA3-211ENST00000557087 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
PSMA3-211ENST00000557087 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
PSMA3-211ENST00000557087 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
PSMA3-211ENST00000557087 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
PSMA3-211ENST00000557087 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
PSMA3-211ENST00000557087 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
PSMA3-211ENST00000557087 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
PSMA3-211ENST00000557087 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
PSMA3-211ENST00000557087 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
PSMA3-211ENST00000557087 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
PSMA3-211ENST00000557087 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
PSMA3-211ENST00000557087 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
PSMA3-211ENST00000557087 HAX1O00165 279 aa15□□□□□ -0.01
PSMA3-211ENST00000557087 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
PSMA3-211ENST00000557087 EVX2Q03828 476 aa15□□□□□ -0.01
PSMA3-211ENST00000557087 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
PSMA3-211ENST00000557087 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
PSMA3-211ENST00000557087 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
PSMA3-211ENST00000557087 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
PSMA3-211ENST00000557087 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
PSMA3-211ENST00000557087 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
PSMA3-211ENST00000557087 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
PSMA3-211ENST00000557087 GABBR2O75899 941 aa14.56□□□□□ -0.08
PSMA3-211ENST00000557087 PROM2Q8N271 834 aa14.53□□□□□ -0.08
PSMA3-211ENST00000557087 CD44P16070 742 aaKnown RBP14.51□□□□□ -0.09
PSMA3-211ENST00000557087 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
PSMA3-211ENST00000557087 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
PSMA3-211ENST00000557087 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
PSMA3-211ENST00000557087 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
PSMA3-211ENST00000557087 CLCN6P51797 869 aa14.2□□□□□ -0.14
PSMA3-211ENST00000557087 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
PSMA3-211ENST00000557087 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
PSMA3-211ENST00000557087 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
PSMA3-211ENST00000557087 FKBP8Q14318 412 aa14.14□□□□□ -0.15
PSMA3-211ENST00000557087 LHX8Q68G74 356 aa14.1□□□□□ -0.15
PSMA3-211ENST00000557087 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
PSMA3-211ENST00000557087 MIER1Q8N108 512 aa14.08□□□□□ -0.16
PSMA3-211ENST00000557087 DCBLD2Q96PD2 775 aa14.08□□□□□ -0.16
PSMA3-211ENST00000557087 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
PSMA3-211ENST00000557087 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
PSMA3-211ENST00000557087 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
PSMA3-211ENST00000557087 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
PSMA3-211ENST00000557087 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms