RNA–Protein interactions for RNA: ENST00000557021.5

UBE2V1-222, Transcript of ubiquitin conjugating enzyme E2 V1, human

TSL 5 BASIC

Gene UBE2V1, Length 2,258 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2V1-222	ENST00000557021	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.27	□□□□□ -0.29	1e-11	■■■■■ 94.4
UBE2V1-222	ENST00000557021	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	16.15	■□□□□ 0.18	4e-17	■■■■■ 86.5
UBE2V1-222	ENST00000557021	SF3B1	O75533	1304 aa	Known RBP eCLIP	14.53	□□□□□ -0.08	2e-6	■■■■■ 59.4
UBE2V1-222	ENST00000557021	CSTF2	P33240	577 aa	Known RBP eCLIP	13	□□□□□ -0.33	7e-7	■■■■■ 54.7
UBE2V1-222	ENST00000557021	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.99	□□□□□ -0.49	2e-18	■■■■■ 46.4
UBE2V1-222	ENST00000557021	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	2e-9	■■■■■ 39.6
UBE2V1-222	ENST00000557021	METAP2	P50579	478 aa	Known RBP eCLIP	15.8	■□□□□ 0.12	2e-22	■■■■■ 36.2
UBE2V1-222	ENST00000557021	FMR1	Q06787	632 aa	Known RBP eCLIP	16.36	■□□□□ 0.21	9e-7	■■■■■ 31.6
UBE2V1-222	ENST00000557021	PCBP2	Q15366	365 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	1e-24	■■■■■ 31.1
UBE2V1-222	ENST00000557021	KHSRP	Q92945	711 aa	Known RBP eCLIP	14.2	□□□□□ -0.14	3e-13	■■■■■ 28
UBE2V1-222	ENST00000557021	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.61	□□□□□ -0.71	1e-8	■■■■□ 25.4
UBE2V1-222	ENST00000557021	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.16	■□□□□ 0.5	5e-7	■■■■□ 21.6
UBE2V1-222	ENST00000557021	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	4e-16	■■■■□ 21.3
UBE2V1-222	ENST00000557021	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.43	□□□□□ -0.26	3e-9	■■■■□ 21.3
UBE2V1-222	ENST00000557021	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	15.34	■□□□□ 0.05	5e-6	■■■□□ 18.6
UBE2V1-222	ENST00000557021	TIA1	P31483	386 aa	Known RBP eCLIP	12.77	□□□□□ -0.37	3e-8	■■■□□ 15
UBE2V1-222	ENST00000557021	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	14.13	□□□□□ -0.15	9e-8	■■□□□ 14.5
UBE2V1-222	ENST00000557021	PABPC4	Q13310	644 aa	Known RBP eCLIP	15.73	■□□□□ 0.11	6e-8	■■□□□ 14.5
UBE2V1-222	ENST00000557021	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	4e-11	■■□□□ 14.4
UBE2V1-222	ENST00000557021	MATR3	P43243	847 aa	Known RBP eCLIP	14.89	□□□□□ -0.03	6e-7	■■□□□ 14.2
UBE2V1-222	ENST00000557021	GTF2F1	P35269	517 aa	Known RBP eCLIP	14.53	□□□□□ -0.08	4e-6	■■□□□ 14.1
UBE2V1-222	ENST00000557021	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	2e-6	■■□□□ 13.5
UBE2V1-222	ENST00000557021	PCBP1	Q15365	356 aa	Known RBP eCLIP	14.75	□□□□□ -0.05	3e-13	■■□□□ 13.4
UBE2V1-222	ENST00000557021	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.31	□□□□□ -0.28	5e-8	■■□□□ 13.1
UBE2V1-222	ENST00000557021	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.22	□□□□□ -0.61	5e-8	■■□□□ 12.9
UBE2V1-222	ENST00000557021	IGF2BP3	O00425	579 aa	Known RBP eCLIP	15.88	■□□□□ 0.13	8e-8	■■□□□ 12.6
UBE2V1-222	ENST00000557021	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	17.86	■□□□□ 0.45	3e-23	■■□□□ 12.6
UBE2V1-222	ENST00000557021	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.69	□□□□□ -0.7	2e-6	■■□□□ 12.4
UBE2V1-222	ENST00000557021	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.77	■□□□□ 0.6	9e-7	■■□□□ 12.4
UBE2V1-222	ENST00000557021	NOLC1	Q14978	699 aa	Known RBP eCLIP	14.8	□□□□□ -0.04	1e-6	■■□□□ 12.1
UBE2V1-222	ENST00000557021	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	2e-7	■■□□□ 12.1
UBE2V1-222	ENST00000557021	U2AF2	P26368	475 aa	Known RBP eCLIP	15.42	■□□□□ 0.06	3e-14	■■□□□ 11.4
UBE2V1-222	ENST00000557021	YBX3	P16989	372 aa	Known RBP eCLIP	16.87	■□□□□ 0.29	6e-7	■□□□□ 10.5
UBE2V1-222	ENST00000557021	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	14.13	□□□□□ -0.15	1e-18	■□□□□ 10.3
UBE2V1-222	ENST00000557021	CDC40	O60508	579 aa	Known RBP eCLIP	12.39	□□□□□ -0.43	3e-7	■□□□□ 10.1
UBE2V1-222	ENST00000557021	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.92	□□□□□ -0.34	6e-7	■□□□□ 10
UBE2V1-222	ENST00000557021	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	20.38	■□□□□ 0.85	1e-10	■□□□□ 9.5
UBE2V1-222	ENST00000557021	ZC3H11A	O75152	810 aa	Known RBP eCLIP	14.72	□□□□□ -0.05	3e-6	■□□□□ 9.3
UBE2V1-222	ENST00000557021	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	6e-9	■□□□□ 8.8
UBE2V1-222	ENST00000557021	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	14.36	□□□□□ -0.11	3e-7	■□□□□ 8.7
UBE2V1-222	ENST00000557021	PRPF4	O43172	522 aa	Known RBP eCLIP	13	□□□□□ -0.33	2e-6	■□□□□ 8.6
UBE2V1-222	ENST00000557021	NCBP2	P52298	156 aa	Known RBP eCLIP	12.67	□□□□□ -0.38	9e-6	■□□□□ 8.4

Retrieved 42 of 42 RNA–protein pairs in 428.7 ms