RNA: ENST00000556895.5

LINC01578-207, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 802 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-207ENST00000556895 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.56■■■□□ 2.81e-26■□□□□ 9.9
LINC01578-207ENST00000556895 PRPF4O43172 522 aaKnown RBP eCLIP26.89■■□□□ 1.92e-21■■■■■ 34.2
LINC01578-207ENST00000556895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.61■■■□□ 2.972e-17■□□□□ 10.4
LINC01578-207ENST00000556895 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.35■■■□□ 2.294e-16■□□□□ 8.7
LINC01578-207ENST00000556895 GTF2F1P35269 517 aaKnown RBP eCLIP31.42■■■□□ 2.627e-16■■□□□ 12.8
LINC01578-207ENST00000556895 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.65■■■□□ 2.987e-15■■■■□ 24.3
LINC01578-207ENST00000556895 U2AF1Q01081 240 aaKnown RBP eCLIP37.86■■■■□ 3.655e-14■■□□□ 12.7
LINC01578-207ENST00000556895 EWSR1Q01844 656 aaKnown RBP eCLIP20.77■□□□□ 0.923e-13■■□□□ 14
LINC01578-207ENST00000556895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.12■■□□□ 1.452e-12■■■■■ 36.6
LINC01578-207ENST00000556895 GPKOWQ92917 476 aaPredicted RBP eCLIP32.58■■■□□ 2.812e-11■□□□□ 11.3
LINC01578-207ENST00000556895 NCBP2P52298 156 aaKnown RBP eCLIP25.88■■□□□ 1.735e-11■■□□□ 13.5
LINC01578-207ENST00000556895 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.56■■□□□ 1.848e-11■■□□□ 11.5
LINC01578-207ENST00000556895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.37■■■■■ 4.538e-11■□□□□ 10.9
LINC01578-207ENST00000556895 NONOQ15233 471 aaKnown RBP eCLIP32.01■■■□□ 2.713e-10■■■■□ 20
LINC01578-207ENST00000556895 EFTUD2Q15029 972 aaKnown RBP eCLIP26.74■■□□□ 1.873e-10■■■■□ 19.7
LINC01578-207ENST00000556895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.44■■■■□ 3.13e-10■■□□□ 13.9
LINC01578-207ENST00000556895 AATFQ9NY61 560 aaKnown RBP eCLIP34.54■■■■□ 3.124e-10■■□□□ 12.9
LINC01578-207ENST00000556895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP46.07■■■■■ 4.976e-10■■■□□ 15.4
LINC01578-207ENST00000556895 NOLC1Q14978 699 aaKnown RBP eCLIP30.96■■■□□ 2.551e-9■■□□□ 12.3
LINC01578-207ENST00000556895 FMR1Q06787 632 aaKnown RBP eCLIP35.72■■■■□ 3.312e-9■■□□□ 12
LINC01578-207ENST00000556895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.07■■□□□ 1.928e-9■■□□□ 11.4
LINC01578-207ENST00000556895 SF3B4Q15427 424 aaKnown RBP eCLIP25.68■■□□□ 1.79e-9■■■■□ 21.9
LINC01578-207ENST00000556895 AQRO60306 1485 aaKnown RBP eCLIP50.34■■■■■ 5.651e-8■■■■□ 19.4
LINC01578-207ENST00000556895 KHSRPQ92945 711 aaKnown RBP eCLIP31.2■■■□□ 2.591e-8■□□□□ 10.2
LINC01578-207ENST00000556895 AARSP49588 968 aaKnown RBP eCLIP30.67■■■□□ 2.51e-8■■■□□ 15.5
LINC01578-207ENST00000556895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP33.29■■■□□ 2.922e-8■■□□□ 14
LINC01578-207ENST00000556895 SND1Q7KZF4 910 aaKnown RBP eCLIP29.16■■■□□ 2.265e-8■□□□□ 10
LINC01578-207ENST00000556895 SRSF9Q13242 221 aaKnown RBP eCLIP17.43■□□□□ 0.386e-8■■□□□ 14.3
LINC01578-207ENST00000556895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.5■■■■□ 3.757e-8■□□□□ 10.6
LINC01578-207ENST00000556895 U2AF2P26368 475 aaKnown RBP eCLIP31.53■■■□□ 2.648e-8■□□□□ 11.1
LINC01578-207ENST00000556895 SRSF1Q07955 248 aaKnown RBP eCLIP26.69■■□□□ 1.869e-8■■■□□ 14.9
LINC01578-207ENST00000556895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.64■■■□□ 2.59e-8■■■■■ 27
LINC01578-207ENST00000556895 UPF1Q92900 1129 aaKnown RBP eCLIP40.25■■■■■ 4.032e-7■■■■■ 44.5
LINC01578-207ENST00000556895 DDX3XO00571 662 aaKnown RBP eCLIP28.88■■■□□ 2.212e-7■■■□□ 14.8
LINC01578-207ENST00000556895 AKAP1Q92667 903 aaKnown RBP eCLIP24.94■■□□□ 1.583e-7■■□□□ 13.7
LINC01578-207ENST00000556895 DDX6P26196 483 aaKnown RBP eCLIP30.16■■■□□ 2.423e-7■■■□□ 16.7
LINC01578-207ENST00000556895 METAP2P50579 478 aaKnown RBP eCLIP32.5■■■□□ 2.793e-7■□□□□ 8.8
LINC01578-207ENST00000556895 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.21■■■■□ 3.074e-7■■■□□ 16.7
LINC01578-207ENST00000556895 HNRNPCP07910 306 aaKnown RBP eCLIP20.84■□□□□ 0.934e-7■■□□□ 11.8
LINC01578-207ENST00000556895 CDC40O60508 579 aaKnown RBP eCLIP26.13■■□□□ 1.776e-7■■□□□ 11.9
LINC01578-207ENST00000556895 XRCC6P12956 609 aaKnown RBP eCLIP31.45■■■□□ 2.636e-7■□□□□ 8.7
LINC01578-207ENST00000556895 RBM15Q96T37 977 aaKnown RBP eCLIP28.26■■■□□ 2.116e-7■■□□□ 13.7
LINC01578-207ENST00000556895 CSTF2P33240 577 aaKnown RBP eCLIP27.79■■■□□ 2.047e-7■■■■□ 22.3
LINC01578-207ENST00000556895 TIA1P31483 386 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■■■■■ 29.2
LINC01578-207ENST00000556895 PHF6Q8IWS0 365 aaKnown RBP eCLIP32■■■□□ 2.711e-6■■□□□ 11.5
LINC01578-207ENST00000556895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.11■■□□□ 1.771e-6■■□□□ 13.1
LINC01578-207ENST00000556895 SUB1P53999 127 aaKnown RBP eCLIP21.12■□□□□ 0.971e-6■■□□□ 12.6
LINC01578-207ENST00000556895 FUSP35637 526 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■□□□ 11.8
LINC01578-207ENST00000556895 RBM22Q9NW64 420 aaKnown RBP eCLIP28.35■■■□□ 2.132e-6■■■■■ 32.7
LINC01578-207ENST00000556895 SF3B1O75533 1304 aaKnown RBP eCLIP30.99■■■□□ 2.554e-6■■■■□ 26.1
LINC01578-207ENST00000556895 TIAL1Q01085 375 aaKnown RBP eCLIP27.07■■□□□ 1.925e-6■■□□□ 11.4
LINC01578-207ENST00000556895 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.88■■■□□ 2.059e-6■□□□□ 10.7
Retrieved 52 of 52 RNA–protein pairs in 31.7 ms