RNA–Protein interactions for RNA: ENST00000556754.1

PNP-207, Transcript of purine nucleoside phosphorylase, humanhuman

TSL 2

Gene PNP, Length 2,573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNP-207ENST00000556754 SF3B1O75533 1304 aaKnown RBP eCLIP9.38□□□□□ -0.911e-8■■■■■ 103.4
PNP-207ENST00000556754 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.02□□□□□ -0.816e-16■■■■■ 89.4
PNP-207ENST00000556754 EFTUD2Q15029 972 aaKnown RBP eCLIP9.42□□□□□ -0.91e-25■■■■■ 63.3
PNP-207ENST00000556754 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.511e-5■■■■■ 50
PNP-207ENST00000556754 RPS3P23396 243 aaKnown RBP eCLIP8.96□□□□□ -0.972e-10■■■■■ 36.2
PNP-207ENST00000556754 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.82□□□□□ -1.322e-8■■■■■ 33.5
PNP-207ENST00000556754 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■■■ 26.9
PNP-207ENST00000556754 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.875e-8■■■■□ 26.2
PNP-207ENST00000556754 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.01□□□□□ -0.977e-8■■■■□ 22.1
PNP-207ENST00000556754 G3BP1Q13283 466 aaKnown RBP eCLIP10.94□□□□□ -0.668e-6■■■■□ 20.2
PNP-207ENST00000556754 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.04□□□□□ -0.969e-7■■■□□ 18.4
PNP-207ENST00000556754 SF3B4Q15427 424 aaKnown RBP eCLIP8.78□□□□□ -14e-9■■■□□ 18
PNP-207ENST00000556754 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.39□□□□□ -0.752e-8■■■□□ 17
PNP-207ENST00000556754 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.543e-12■■□□□ 13
PNP-207ENST00000556754 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.37□□□□□ -0.752e-10■■□□□ 11.8
PNP-207ENST00000556754 ZRANB2O95218 330 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■□□□□ 11.3
PNP-207ENST00000556754 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.545e-8■□□□□ 11.3
PNP-207ENST00000556754 PABPC4Q13310 644 aaKnown RBP eCLIP9.91□□□□□ -0.821e-8■□□□□ 10.6
PNP-207ENST00000556754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.79□□□□□ -0.368e-6■□□□□ 10.5
PNP-207ENST00000556754 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.85□□□□□ -0.673e-6■□□□□ 10.3
PNP-207ENST00000556754 U2AF2P26368 475 aaKnown RBP eCLIP10.65□□□□□ -0.712e-10■□□□□ 10
PNP-207ENST00000556754 YBX3P16989 372 aaKnown RBP eCLIP9.61□□□□□ -0.872e-8■□□□□ 8.8
Retrieved 22 of 22 RNA–protein pairs in 5.5 ms