RNA–Protein interactions for RNA: ENST00000556563.5

CCNB1IP1-213, Transcript of cyclin B1 interacting protein 1, humanhuman

TSL 3

Gene CCNB1IP1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1-213ENST00000556563 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
CCNB1IP1-213ENST00000556563 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
CCNB1IP1-213ENST00000556563 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
CCNB1IP1-213ENST00000556563 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
CCNB1IP1-213ENST00000556563 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
CCNB1IP1-213ENST00000556563 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
CCNB1IP1-213ENST00000556563 FOXD1Q16676 465 aa15.44■□□□□ 0.06
CCNB1IP1-213ENST00000556563 ADRA2BP18089 450 aa15.04■□□□□ -0
CCNB1IP1-213ENST00000556563 PPP6R1Q9UPN7 881 aa15.02■□□□□ -0
CCNB1IP1-213ENST00000556563 ABCC9O60706 1549 aa14.9□□□□□ -0.02
CCNB1IP1-213ENST00000556563 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
CCNB1IP1-213ENST00000556563 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
CCNB1IP1-213ENST00000556563 MSH5O43196 834 aa14.2□□□□□ -0.14
CCNB1IP1-213ENST00000556563 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
CCNB1IP1-213ENST00000556563 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
CCNB1IP1-213ENST00000556563 UNC13AQ9UPW8 1703 aa14.02□□□□□ -0.16
CCNB1IP1-213ENST00000556563 NACADO15069 1562 aa14.02□□□□□ -0.16
CCNB1IP1-213ENST00000556563 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
CCNB1IP1-213ENST00000556563 KCNA4P22459 653 aa13.95□□□□□ -0.18
CCNB1IP1-213ENST00000556563 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
CCNB1IP1-213ENST00000556563 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
CCNB1IP1-213ENST00000556563 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCNB1IP1-213ENST00000556563 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
CCNB1IP1-213ENST00000556563 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
CCNB1IP1-213ENST00000556563 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
CCNB1IP1-213ENST00000556563 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.21
CCNB1IP1-213ENST00000556563 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
CCNB1IP1-213ENST00000556563 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
CCNB1IP1-213ENST00000556563 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
CCNB1IP1-213ENST00000556563 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
CCNB1IP1-213ENST00000556563 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
CCNB1IP1-213ENST00000556563 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
CCNB1IP1-213ENST00000556563 SHROOM4Q9ULL8 1493 aa13.47□□□□□ -0.25
CCNB1IP1-213ENST00000556563 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
CCNB1IP1-213ENST00000556563 CECR2Q9BXF3 1484 aa13.39□□□□□ -0.27
CCNB1IP1-213ENST00000556563 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
CCNB1IP1-213ENST00000556563 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
CCNB1IP1-213ENST00000556563 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
CCNB1IP1-213ENST00000556563 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
CCNB1IP1-213ENST00000556563 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
CCNB1IP1-213ENST00000556563 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
CCNB1IP1-213ENST00000556563 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
CCNB1IP1-213ENST00000556563 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
CCNB1IP1-213ENST00000556563 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
CCNB1IP1-213ENST00000556563 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
CCNB1IP1-213ENST00000556563 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
CCNB1IP1-213ENST00000556563 NESP48681 1621 aa12.83□□□□□ -0.36
CCNB1IP1-213ENST00000556563 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
CCNB1IP1-213ENST00000556563 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
CCNB1IP1-213ENST00000556563 ZBTB22O15209 634 aa12.81□□□□□ -0.36
CCNB1IP1-213ENST00000556563 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
CCNB1IP1-213ENST00000556563 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
CCNB1IP1-213ENST00000556563 CUX2O14529 1486 aa12.78□□□□□ -0.36
CCNB1IP1-213ENST00000556563 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
CCNB1IP1-213ENST00000556563 MROH2BQ7Z745 1585 aa12.78□□□□□ -0.36
CCNB1IP1-213ENST00000556563 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
CCNB1IP1-213ENST00000556563 DNAJC5Q9H3Z4 198 aa12.78□□□□□ -0.36
CCNB1IP1-213ENST00000556563 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
CCNB1IP1-213ENST00000556563 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
CCNB1IP1-213ENST00000556563 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
CCNB1IP1-213ENST00000556563 WIZO95785 1651 aa12.68□□□□□ -0.38
CCNB1IP1-213ENST00000556563 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
CCNB1IP1-213ENST00000556563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCNB1IP1-213ENST00000556563 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
CCNB1IP1-213ENST00000556563 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
CCNB1IP1-213ENST00000556563 CADPSQ9ULU8 1353 aa12.52□□□□□ -0.41
CCNB1IP1-213ENST00000556563 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
CCNB1IP1-213ENST00000556563 WDR62O43379 1518 aa12.48□□□□□ -0.41
CCNB1IP1-213ENST00000556563 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
CCNB1IP1-213ENST00000556563 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.41
CCNB1IP1-213ENST00000556563 TOP2AP11388 1531 aaKnown RBP12.44□□□□□ -0.42
CCNB1IP1-213ENST00000556563 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CCNB1IP1-213ENST00000556563 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
CCNB1IP1-213ENST00000556563 FANCD2Q9BXW9 1451 aa12.41□□□□□ -0.42
CCNB1IP1-213ENST00000556563 CFTRP13569 1480 aa12.4□□□□□ -0.43
CCNB1IP1-213ENST00000556563 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
CCNB1IP1-213ENST00000556563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
CCNB1IP1-213ENST00000556563 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
CCNB1IP1-213ENST00000556563 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
CCNB1IP1-213ENST00000556563 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
CCNB1IP1-213ENST00000556563 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
CCNB1IP1-213ENST00000556563 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
CCNB1IP1-213ENST00000556563 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
CCNB1IP1-213ENST00000556563 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
CCNB1IP1-213ENST00000556563 APLP2Q06481 763 aa12.2□□□□□ -0.46
CCNB1IP1-213ENST00000556563 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
CCNB1IP1-213ENST00000556563 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
CCNB1IP1-213ENST00000556563 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
CCNB1IP1-213ENST00000556563 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
CCNB1IP1-213ENST00000556563 IFT140Q96RY7 1462 aa12.15□□□□□ -0.46
CCNB1IP1-213ENST00000556563 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
CCNB1IP1-213ENST00000556563 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.47
CCNB1IP1-213ENST00000556563 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.47
CCNB1IP1-213ENST00000556563 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.47
CCNB1IP1-213ENST00000556563 CHD1O14646 1710 aa12.14□□□□□ -0.47
CCNB1IP1-213ENST00000556563 TARBP1Q13395 1621 aaKnown RBP12.14□□□□□ -0.47
CCNB1IP1-213ENST00000556563 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
CCNB1IP1-213ENST00000556563 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
CCNB1IP1-213ENST00000556563 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.48
CCNB1IP1-213ENST00000556563 C1QBPQ07021 282 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms