RNA–Protein interactions for RNA: ENST00000556449.5

ACTR10-212, Transcript of actin related protein 10 homolog, humanhuman

TSL 2

Gene ACTR10, Length 489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-212ENST00000556449 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
ACTR10-212ENST00000556449 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
ACTR10-212ENST00000556449 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
ACTR10-212ENST00000556449 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
ACTR10-212ENST00000556449 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
ACTR10-212ENST00000556449 FOXD1Q16676 465 aa20.92■□□□□ 0.94
ACTR10-212ENST00000556449 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
ACTR10-212ENST00000556449 ADRA2BP18089 450 aa20.27■□□□□ 0.84
ACTR10-212ENST00000556449 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
ACTR10-212ENST00000556449 MSH5O43196 834 aa19.18■□□□□ 0.66
ACTR10-212ENST00000556449 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
ACTR10-212ENST00000556449 KCNA4P22459 653 aa18.57■□□□□ 0.56
ACTR10-212ENST00000556449 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
ACTR10-212ENST00000556449 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
ACTR10-212ENST00000556449 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
ACTR10-212ENST00000556449 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
ACTR10-212ENST00000556449 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
ACTR10-212ENST00000556449 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
ACTR10-212ENST00000556449 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
ACTR10-212ENST00000556449 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
ACTR10-212ENST00000556449 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
ACTR10-212ENST00000556449 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
ACTR10-212ENST00000556449 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
ACTR10-212ENST00000556449 DCAF8L1A6NGE4 600 aa17.25■□□□□ 0.35
ACTR10-212ENST00000556449 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
ACTR10-212ENST00000556449 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
ACTR10-212ENST00000556449 ZBTB22O15209 634 aa17.1■□□□□ 0.33
ACTR10-212ENST00000556449 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
ACTR10-212ENST00000556449 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
ACTR10-212ENST00000556449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
ACTR10-212ENST00000556449 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
ACTR10-212ENST00000556449 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
ACTR10-212ENST00000556449 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
ACTR10-212ENST00000556449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
ACTR10-212ENST00000556449 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
ACTR10-212ENST00000556449 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
ACTR10-212ENST00000556449 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
ACTR10-212ENST00000556449 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
ACTR10-212ENST00000556449 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
ACTR10-212ENST00000556449 APLP2Q06481 763 aa16.21■□□□□ 0.19
ACTR10-212ENST00000556449 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
ACTR10-212ENST00000556449 CAPN15O75808 1086 aa16.06■□□□□ 0.16
ACTR10-212ENST00000556449 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
ACTR10-212ENST00000556449 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
ACTR10-212ENST00000556449 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
ACTR10-212ENST00000556449 POLA2Q14181 598 aa15.81■□□□□ 0.12
ACTR10-212ENST00000556449 ABCB7O75027 752 aa15.79■□□□□ 0.12
ACTR10-212ENST00000556449 DSG3P32926 999 aa15.74■□□□□ 0.11
ACTR10-212ENST00000556449 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
ACTR10-212ENST00000556449 FBLN2P98095 1184 aa15.53■□□□□ 0.08
ACTR10-212ENST00000556449 ZBTB12Q9Y330 459 aaPredicted RBP15.49■□□□□ 0.07
ACTR10-212ENST00000556449 FKBP8Q14318 412 aa15.48■□□□□ 0.07
ACTR10-212ENST00000556449 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
ACTR10-212ENST00000556449 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
ACTR10-212ENST00000556449 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
ACTR10-212ENST00000556449 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
ACTR10-212ENST00000556449 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
ACTR10-212ENST00000556449 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
ACTR10-212ENST00000556449 PROM2Q8N271 834 aa15.04■□□□□ -0
ACTR10-212ENST00000556449 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
ACTR10-212ENST00000556449 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
ACTR10-212ENST00000556449 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
ACTR10-212ENST00000556449 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
ACTR10-212ENST00000556449 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
ACTR10-212ENST00000556449 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
ACTR10-212ENST00000556449 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
ACTR10-212ENST00000556449 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
ACTR10-212ENST00000556449 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
ACTR10-212ENST00000556449 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
ACTR10-212ENST00000556449 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
ACTR10-212ENST00000556449 IFNLR1Q8IU57 520 aaPredicted RBP14.49□□□□□ -0.09
ACTR10-212ENST00000556449 MIER1Q8N108 512 aa14.48□□□□□ -0.09
ACTR10-212ENST00000556449 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
ACTR10-212ENST00000556449 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
ACTR10-212ENST00000556449 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
ACTR10-212ENST00000556449 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
ACTR10-212ENST00000556449 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
ACTR10-212ENST00000556449 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
ACTR10-212ENST00000556449 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
ACTR10-212ENST00000556449 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
ACTR10-212ENST00000556449 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
ACTR10-212ENST00000556449 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
ACTR10-212ENST00000556449 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
ACTR10-212ENST00000556449 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
ACTR10-212ENST00000556449 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
ACTR10-212ENST00000556449 PRKAR2AP13861 404 aaKnown RBP14.18□□□□□ -0.14
ACTR10-212ENST00000556449 PIP4P2Q8N4L2 257 aa14.16□□□□□ -0.14
ACTR10-212ENST00000556449 NUBP1P53384 320 aa14.09□□□□□ -0.15
ACTR10-212ENST00000556449 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
ACTR10-212ENST00000556449 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
ACTR10-212ENST00000556449 PKD2Q13563 968 aa14.07□□□□□ -0.16
ACTR10-212ENST00000556449 CIZ1Q9ULV3 898 aaPredicted RBP14.03□□□□□ -0.16
ACTR10-212ENST00000556449 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
ACTR10-212ENST00000556449 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
ACTR10-212ENST00000556449 GSE1Q14687 1217 aa13.96□□□□□ -0.17
ACTR10-212ENST00000556449 FAM212AQ96EL1 285 aa13.96□□□□□ -0.17
ACTR10-212ENST00000556449 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
ACTR10-212ENST00000556449 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
ACTR10-212ENST00000556449 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
ACTR10-212ENST00000556449 RGL2O15211 777 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms