RNA–Protein interactions for RNA: ENST00000556238.5

DPF3-209, Transcript of double PHD fingers 3, humanhuman

TSL 2

Gene DPF3, Length 513 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPF3-209ENST00000556238 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
DPF3-209ENST00000556238 ABCC9O60706 1549 aa23.67■■□□□ 1.38
DPF3-209ENST00000556238 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
DPF3-209ENST00000556238 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
DPF3-209ENST00000556238 NACADO15069 1562 aa22.42■■□□□ 1.18
DPF3-209ENST00000556238 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
DPF3-209ENST00000556238 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
DPF3-209ENST00000556238 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
DPF3-209ENST00000556238 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
DPF3-209ENST00000556238 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
DPF3-209ENST00000556238 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
DPF3-209ENST00000556238 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
DPF3-209ENST00000556238 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
DPF3-209ENST00000556238 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
DPF3-209ENST00000556238 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
DPF3-209ENST00000556238 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
DPF3-209ENST00000556238 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
DPF3-209ENST00000556238 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
DPF3-209ENST00000556238 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
DPF3-209ENST00000556238 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
DPF3-209ENST00000556238 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
DPF3-209ENST00000556238 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
DPF3-209ENST00000556238 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
DPF3-209ENST00000556238 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
DPF3-209ENST00000556238 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
DPF3-209ENST00000556238 CUX2O14529 1486 aa20.45■□□□□ 0.86
DPF3-209ENST00000556238 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
DPF3-209ENST00000556238 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
DPF3-209ENST00000556238 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
DPF3-209ENST00000556238 NESP48681 1621 aa20.33■□□□□ 0.84
DPF3-209ENST00000556238 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
DPF3-209ENST00000556238 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
DPF3-209ENST00000556238 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
DPF3-209ENST00000556238 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
DPF3-209ENST00000556238 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.81
DPF3-209ENST00000556238 WIZO95785 1651 aa20.05■□□□□ 0.8
DPF3-209ENST00000556238 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
DPF3-209ENST00000556238 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
DPF3-209ENST00000556238 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
DPF3-209ENST00000556238 WDR62O43379 1518 aa19.87■□□□□ 0.77
DPF3-209ENST00000556238 CFTRP13569 1480 aa19.85■□□□□ 0.77
DPF3-209ENST00000556238 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
DPF3-209ENST00000556238 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
DPF3-209ENST00000556238 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
DPF3-209ENST00000556238 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
DPF3-209ENST00000556238 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
DPF3-209ENST00000556238 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
DPF3-209ENST00000556238 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
DPF3-209ENST00000556238 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
DPF3-209ENST00000556238 IFT140Q96RY7 1462 aa19.46■□□□□ 0.71
DPF3-209ENST00000556238 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
DPF3-209ENST00000556238 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
DPF3-209ENST00000556238 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
DPF3-209ENST00000556238 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
DPF3-209ENST00000556238 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
DPF3-209ENST00000556238 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
DPF3-209ENST00000556238 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
DPF3-209ENST00000556238 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
DPF3-209ENST00000556238 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
DPF3-209ENST00000556238 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
DPF3-209ENST00000556238 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
DPF3-209ENST00000556238 SOGA1O94964 1423 aa19.17■□□□□ 0.66
DPF3-209ENST00000556238 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
DPF3-209ENST00000556238 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
DPF3-209ENST00000556238 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
DPF3-209ENST00000556238 CHD1O14646 1710 aa19.11■□□□□ 0.65
DPF3-209ENST00000556238 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
DPF3-209ENST00000556238 FBLN2P98095 1184 aa19.1■□□□□ 0.65
DPF3-209ENST00000556238 CUX1P39880 1505 aa19.09■□□□□ 0.65
DPF3-209ENST00000556238 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
DPF3-209ENST00000556238 CYB5RLQ6IPT4 315 aa19.06■□□□□ 0.64
DPF3-209ENST00000556238 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
DPF3-209ENST00000556238 GRIN2BQ13224 1484 aa19■□□□□ 0.63
DPF3-209ENST00000556238 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
DPF3-209ENST00000556238 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
DPF3-209ENST00000556238 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
DPF3-209ENST00000556238 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
DPF3-209ENST00000556238 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
DPF3-209ENST00000556238 SYNJ2O15056 1496 aa18.93■□□□□ 0.62
DPF3-209ENST00000556238 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
DPF3-209ENST00000556238 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
DPF3-209ENST00000556238 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
DPF3-209ENST00000556238 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
DPF3-209ENST00000556238 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
DPF3-209ENST00000556238 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
DPF3-209ENST00000556238 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
DPF3-209ENST00000556238 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
DPF3-209ENST00000556238 BIVM-ERCC5R4GMW8 1640 aa18.77■□□□□ 0.6
DPF3-209ENST00000556238 GRIN2AQ12879 1464 aa18.74■□□□□ 0.59
DPF3-209ENST00000556238 NUP160Q12769 1436 aa18.71■□□□□ 0.59
DPF3-209ENST00000556238 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
DPF3-209ENST00000556238 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
DPF3-209ENST00000556238 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
DPF3-209ENST00000556238 CEP170Q5SW79 1584 aa18.65■□□□□ 0.58
DPF3-209ENST00000556238 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
DPF3-209ENST00000556238 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
DPF3-209ENST00000556238 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
DPF3-209ENST00000556238 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
DPF3-209ENST00000556238 IGF1RP08069 1367 aa18.46■□□□□ 0.55
DPF3-209ENST00000556238 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms