RNA–Protein interactions for RNA: ENST00000556223.1

ERO1A-207, Transcript of endoplasmic reticulum oxidoreductase 1 alpha, humanhuman

TSL 4

Gene ERO1A, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERO1A-207ENST00000556223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.356e-9■■■■■ 134.6
ERO1A-207ENST00000556223 RPS3P23396 243 aaKnown RBP eCLIP15.73■□□□□ 0.116e-10■■■■■ 66.6
ERO1A-207ENST00000556223 DDX3XO00571 662 aaKnown RBP eCLIP16.57■□□□□ 0.242e-15■■■■■ 46
ERO1A-207ENST00000556223 RBM22Q9NW64 420 aaKnown RBP eCLIP16.28■□□□□ 0.25e-8■■■■■ 31.8
ERO1A-207ENST00000556223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.9□□□□□ -0.182e-11■■■■□ 23.4
ERO1A-207ENST00000556223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■■■□ 22
ERO1A-207ENST00000556223 PPIGQ13427 754 aaKnown RBP eCLIP18.77■□□□□ 0.61e-11■■■□□ 17.1
ERO1A-207ENST00000556223 SND1Q7KZF4 910 aaKnown RBP eCLIP16.75■□□□□ 0.278e-8■■■□□ 16.8
ERO1A-207ENST00000556223 HNRNPMP52272 730 aaKnown RBP eCLIP25.79■■□□□ 1.726e-8■■■□□ 15.8
ERO1A-207ENST00000556223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.663e-6■■■□□ 15.3
ERO1A-207ENST00000556223 SF3B4Q15427 424 aaKnown RBP eCLIP14.82□□□□□ -0.042e-8■■■□□ 15.1
ERO1A-207ENST00000556223 GRSF1Q12849 480 aaKnown RBP eCLIP17.2■□□□□ 0.345e-22■■□□□ 13.1
ERO1A-207ENST00000556223 FXR2P51116 673 aaKnown RBP eCLIP18.08■□□□□ 0.482e-9■■□□□ 11.4
ERO1A-207ENST00000556223 U2AF2P26368 475 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■□□□ 11.4
ERO1A-207ENST00000556223 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.14■□□□□ 0.014e-6■□□□□ 10.9
ERO1A-207ENST00000556223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.42■□□□□ 0.543e-9■□□□□ 10.1
ERO1A-207ENST00000556223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.2■■□□□ 1.145e-14■□□□□ 9.7
ERO1A-207ENST00000556223 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.226e-7■□□□□ 9.4
ERO1A-207ENST00000556223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.98■■□□□ 1.594e-8■□□□□ 8.4
ERO1A-207ENST00000556223 FTOQ9C0B1 505 aaKnown RBP eCLIP18.57■□□□□ 0.569e-10■□□□□ 8.3
Retrieved 20 of 20 RNA–protein pairs in 7 ms