RNA–Protein interactions for RNA: ENST00000555912.1

PAPOLA-217, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-217ENST00000555912 NISCHQ9Y2I1 1504 aa17.39■□□□□ 0.37
PAPOLA-217ENST00000555912 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
PAPOLA-217ENST00000555912 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
PAPOLA-217ENST00000555912 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
PAPOLA-217ENST00000555912 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
PAPOLA-217ENST00000555912 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
PAPOLA-217ENST00000555912 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
PAPOLA-217ENST00000555912 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
PAPOLA-217ENST00000555912 PHF23Q9BUL5 403 aaPredicted RBP14.32□□□□□ -0.12
PAPOLA-217ENST00000555912 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
PAPOLA-217ENST00000555912 ABCC9O60706 1549 aa14.04□□□□□ -0.16
PAPOLA-217ENST00000555912 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
PAPOLA-217ENST00000555912 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
PAPOLA-217ENST00000555912 NACADO15069 1562 aa13.84□□□□□ -0.19
PAPOLA-217ENST00000555912 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
PAPOLA-217ENST00000555912 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
PAPOLA-217ENST00000555912 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
PAPOLA-217ENST00000555912 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
PAPOLA-217ENST00000555912 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
PAPOLA-217ENST00000555912 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
PAPOLA-217ENST00000555912 LOC105371045A0A1W2PR82 267 aa13.41□□□□□ -0.26
PAPOLA-217ENST00000555912 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
PAPOLA-217ENST00000555912 WIZO95785 1651 aa13.39□□□□□ -0.27
PAPOLA-217ENST00000555912 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
PAPOLA-217ENST00000555912 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
PAPOLA-217ENST00000555912 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
PAPOLA-217ENST00000555912 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
PAPOLA-217ENST00000555912 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
PAPOLA-217ENST00000555912 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
PAPOLA-217ENST00000555912 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
PAPOLA-217ENST00000555912 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
PAPOLA-217ENST00000555912 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
PAPOLA-217ENST00000555912 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
PAPOLA-217ENST00000555912 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
PAPOLA-217ENST00000555912 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
PAPOLA-217ENST00000555912 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
PAPOLA-217ENST00000555912 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
PAPOLA-217ENST00000555912 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
PAPOLA-217ENST00000555912 BAZ1BQ9UIG0 1483 aaKnown RBP12.99□□□□□ -0.33
PAPOLA-217ENST00000555912 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
PAPOLA-217ENST00000555912 HRCP23327 699 aa12.96□□□□□ -0.33
PAPOLA-217ENST00000555912 SOGA1O94964 1423 aa12.9□□□□□ -0.34
PAPOLA-217ENST00000555912 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
PAPOLA-217ENST00000555912 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
PAPOLA-217ENST00000555912 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
PAPOLA-217ENST00000555912 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
PAPOLA-217ENST00000555912 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
PAPOLA-217ENST00000555912 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
PAPOLA-217ENST00000555912 EEA1Q15075 1411 aa12.81□□□□□ -0.36
PAPOLA-217ENST00000555912 SYNJ1O43426 1573 aa12.77□□□□□ -0.37
PAPOLA-217ENST00000555912 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
PAPOLA-217ENST00000555912 TNIKQ9UKE5 1360 aa12.74□□□□□ -0.37
PAPOLA-217ENST00000555912 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
PAPOLA-217ENST00000555912 GOLGA3Q08378 1498 aa12.69□□□□□ -0.38
PAPOLA-217ENST00000555912 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
PAPOLA-217ENST00000555912 CFTRP13569 1480 aa12.65□□□□□ -0.38
PAPOLA-217ENST00000555912 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
PAPOLA-217ENST00000555912 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
PAPOLA-217ENST00000555912 RANGAP1P46060 587 aaPredicted RBP12.63□□□□□ -0.39
PAPOLA-217ENST00000555912 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
PAPOLA-217ENST00000555912 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
PAPOLA-217ENST00000555912 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
PAPOLA-217ENST00000555912 CUX1P39880 1505 aa12.59□□□□□ -0.39
PAPOLA-217ENST00000555912 FOXD1Q16676 465 aa12.58□□□□□ -0.4
PAPOLA-217ENST00000555912 RAPGEF2Q9Y4G8 1499 aa12.58□□□□□ -0.4
PAPOLA-217ENST00000555912 KIF21BO75037 1637 aa12.57□□□□□ -0.4
PAPOLA-217ENST00000555912 BIVM-ERCC5R4GMW8 1640 aa12.57□□□□□ -0.4
PAPOLA-217ENST00000555912 CLIP1P30622 1438 aa12.56□□□□□ -0.4
PAPOLA-217ENST00000555912 ADRA2BP18089 450 aa12.55□□□□□ -0.4
PAPOLA-217ENST00000555912 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
PAPOLA-217ENST00000555912 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
PAPOLA-217ENST00000555912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
PAPOLA-217ENST00000555912 APLP2Q06481 763 aa12.5□□□□□ -0.41
PAPOLA-217ENST00000555912 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
PAPOLA-217ENST00000555912 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
PAPOLA-217ENST00000555912 VPS8Q8N3P4 1428 aa12.46□□□□□ -0.42
PAPOLA-217ENST00000555912 CUX2O14529 1486 aa12.45□□□□□ -0.42
PAPOLA-217ENST00000555912 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
PAPOLA-217ENST00000555912 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
PAPOLA-217ENST00000555912 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
PAPOLA-217ENST00000555912 IGF1RP08069 1367 aa12.42□□□□□ -0.42
PAPOLA-217ENST00000555912 NESP48681 1621 aa12.41□□□□□ -0.42
PAPOLA-217ENST00000555912 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
PAPOLA-217ENST00000555912 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
PAPOLA-217ENST00000555912 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
PAPOLA-217ENST00000555912 CARMIL1Q5VZK9 1371 aa12.37□□□□□ -0.43
PAPOLA-217ENST00000555912 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
PAPOLA-217ENST00000555912 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.43
PAPOLA-217ENST00000555912 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
PAPOLA-217ENST00000555912 DNMBPQ6XZF7 1577 aa12.31□□□□□ -0.44
PAPOLA-217ENST00000555912 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
PAPOLA-217ENST00000555912 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
PAPOLA-217ENST00000555912 ARHGAP35Q9NRY4 1499 aa12.29□□□□□ -0.44
PAPOLA-217ENST00000555912 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
PAPOLA-217ENST00000555912 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
PAPOLA-217ENST00000555912 P3H3Q8IVL6 736 aa12.26□□□□□ -0.45
PAPOLA-217ENST00000555912 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
PAPOLA-217ENST00000555912 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
PAPOLA-217ENST00000555912 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
PAPOLA-217ENST00000555912 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms