RNA–Protein interactions for RNA: ENST00000555770.1

CKB-214, Transcript of creatine kinase B, humanhuman

TSL 4

Gene CKB, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-214ENST00000555770 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.9■■□□□ 1.744e-12■■■■■ 139.7
CKB-214ENST00000555770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.75■■■□□ 2.031e-7■■■■■ 115.4
CKB-214ENST00000555770 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.56■■■□□ 2.83e-19■■■■■ 108.1
CKB-214ENST00000555770 AATFQ9NY61 560 aaKnown RBP eCLIP32.38■■■□□ 2.772e-21■■■■■ 73.9
CKB-214ENST00000555770 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.55■■■□□ 27e-8■■■■■ 73.4
CKB-214ENST00000555770 NIPBLQ6KC79 2804 aaeCLIP24.59■■□□□ 1.531e-12■■■■■ 72.1
CKB-214ENST00000555770 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.1■■□□□ 1.452e-23■■■■■ 66.4
CKB-214ENST00000555770 GPKOWQ92917 476 aaPredicted RBP eCLIP30.6■■■□□ 2.491e-8■■■■■ 65.4
CKB-214ENST00000555770 PCBP1Q15365 356 aaKnown RBP eCLIP29.33■■■□□ 2.292e-8■■■■■ 57.1
CKB-214ENST00000555770 WRNQ14191 1432 aaPredicted RBP eCLIP47.64■■■■■ 5.227e-7■■■■■ 52.5
CKB-214ENST00000555770 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.12■■□□□ 1.133e-8■■■■■ 50.5
CKB-214ENST00000555770 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.44■■□□□ 1.53e-6■■■■■ 50.5
CKB-214ENST00000555770 SF3B1O75533 1304 aaKnown RBP eCLIP29.2■■■□□ 2.274e-6■■■■■ 46.7
CKB-214ENST00000555770 NKRFO15226 690 aaKnown RBP eCLIP31.01■■■□□ 2.552e-8■■■■■ 32.4
CKB-214ENST00000555770 DKC1O60832 514 aaKnown RBP eCLIP29.38■■■□□ 2.292e-7■■■■■ 31.2
CKB-214ENST00000555770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.53■■■□□ 2.642e-13■■■■■ 30.7
CKB-214ENST00000555770 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.48■■□□□ 1.992e-6■■■■■ 30.5
CKB-214ENST00000555770 AQRO60306 1485 aaKnown RBP eCLIP48.99■■■■■ 5.433e-7■■■■■ 29.3
CKB-214ENST00000555770 DDX3XO00571 662 aaKnown RBP eCLIP25.97■■□□□ 1.752e-20■■■■□ 25.1
CKB-214ENST00000555770 XRCC6P12956 609 aaKnown RBP eCLIP29.09■■■□□ 2.254e-8■■■■□ 24.4
CKB-214ENST00000555770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP44.27■■■■■ 4.681e-11■■■■□ 22.7
CKB-214ENST00000555770 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.66■■■□□ 2.663e-7■■■■□ 22.2
CKB-214ENST00000555770 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.54■■■□□ 2.641e-7■■■■□ 21
CKB-214ENST00000555770 RPS3P23396 243 aaKnown RBP eCLIP24.91■■□□□ 1.581e-9■■■■□ 19.8
CKB-214ENST00000555770 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.24■■□□□ 1.316e-7■■■□□ 18.1
CKB-214ENST00000555770 SUB1P53999 127 aaKnown RBP eCLIP18.78■□□□□ 0.69e-7■■■□□ 17.7
CKB-214ENST00000555770 EFTUD2Q15029 972 aaKnown RBP eCLIP24.27■■□□□ 1.484e-7■■■□□ 17.1
CKB-214ENST00000555770 PPIGQ13427 754 aaKnown RBP eCLIP31.48■■■□□ 2.631e-7■■■□□ 16.6
CKB-214ENST00000555770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.58■■■□□ 2.815e-7■■■□□ 16
CKB-214ENST00000555770 YBX3P16989 372 aaKnown RBP eCLIP36.95■■■■□ 3.514e-9■■■□□ 15.9
CKB-214ENST00000555770 PUM1Q14671 1186 aaKnown RBP eCLIP29.15■■■□□ 2.264e-7■■■□□ 14.8
CKB-214ENST00000555770 PRPF4O43172 522 aaKnown RBP eCLIP24.96■■□□□ 1.594e-7■■□□□ 13.5
CKB-214ENST00000555770 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.03■■□□□ 1.62e-9■■□□□ 12.5
CKB-214ENST00000555770 RBFOX2O43251 390 aaKnown RBP eCLIP19.3■□□□□ 0.685e-6■□□□□ 10.9
CKB-214ENST00000555770 METAP2P50579 478 aaKnown RBP eCLIP29.74■■■□□ 2.356e-9■□□□□ 10.6
CKB-214ENST00000555770 KHSRPQ92945 711 aaKnown RBP eCLIP30.81■■■□□ 2.524e-7■□□□□ 10.4
CKB-214ENST00000555770 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.36■■□□□ 1.652e-7■□□□□ 8.4
CKB-214ENST00000555770 TIA1P31483 386 aaKnown RBP eCLIP23.49■■□□□ 1.351e-7■□□□□ 8.4
Retrieved 38 of 38 RNA–protein pairs in 7.5 ms