RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
ACTN1-215ENST00000555616 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-215ENST00000555616 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
ACTN1-215ENST00000555616 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
ACTN1-215ENST00000555616 IQGAP2Q13576 1575 aa16.33■□□□□ 0.2
ACTN1-215ENST00000555616 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
ACTN1-215ENST00000555616 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
ACTN1-215ENST00000555616 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-215ENST00000555616 CARMIL2Q6F5E8 1435 aa16.24■□□□□ 0.19
ACTN1-215ENST00000555616 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
ACTN1-215ENST00000555616 DISP1Q96F81 1524 aa16.23■□□□□ 0.19
ACTN1-215ENST00000555616 EEA1Q15075 1411 aa16.22■□□□□ 0.19
ACTN1-215ENST00000555616 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.19
ACTN1-215ENST00000555616 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
ACTN1-215ENST00000555616 PTPRGP23470 1445 aa16.19■□□□□ 0.18
ACTN1-215ENST00000555616 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
ACTN1-215ENST00000555616 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
ACTN1-215ENST00000555616 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
ACTN1-215ENST00000555616 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
ACTN1-215ENST00000555616 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
ACTN1-215ENST00000555616 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
ACTN1-215ENST00000555616 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
ACTN1-215ENST00000555616 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
ACTN1-215ENST00000555616 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
ACTN1-215ENST00000555616 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
ACTN1-215ENST00000555616 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
ACTN1-215ENST00000555616 DIP2BQ9P265 1576 aa16.09■□□□□ 0.17
ACTN1-215ENST00000555616 KIF21BO75037 1637 aa16.08■□□□□ 0.16
ACTN1-215ENST00000555616 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
ACTN1-215ENST00000555616 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-215ENST00000555616 SAMD9Q5K651 1589 aa16.04■□□□□ 0.16
ACTN1-215ENST00000555616 ABCA8O94911 1581 aa16.02■□□□□ 0.16
ACTN1-215ENST00000555616 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
ACTN1-215ENST00000555616 ASXL2Q76L83 1435 aa16.01■□□□□ 0.15
ACTN1-215ENST00000555616 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
ACTN1-215ENST00000555616 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
ACTN1-215ENST00000555616 FAM69CQ0P6D2 419 aa15.99■□□□□ 0.15
ACTN1-215ENST00000555616 GLI2P10070 1586 aa15.96■□□□□ 0.15
ACTN1-215ENST00000555616 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
ACTN1-215ENST00000555616 WDR7Q9Y4E6 1490 aa15.92■□□□□ 0.14
ACTN1-215ENST00000555616 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
ACTN1-215ENST00000555616 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
ACTN1-215ENST00000555616 RAPGEF6Q8TEU7 1601 aa15.88■□□□□ 0.13
ACTN1-215ENST00000555616 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
ACTN1-215ENST00000555616 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
ACTN1-215ENST00000555616 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
ACTN1-215ENST00000555616 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-215ENST00000555616 ATP10BO94823 1461 aa15.84■□□□□ 0.13
ACTN1-215ENST00000555616 NUP153P49790 1475 aaKnown RBP15.84■□□□□ 0.13
ACTN1-215ENST00000555616 KDM6BO15054 1643 aa15.84■□□□□ 0.13
ACTN1-215ENST00000555616 TSPOAP1O95153 1857 aa15.83■□□□□ 0.12
ACTN1-215ENST00000555616 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-215ENST00000555616 TEX14Q8IWB6 1497 aa15.81■□□□□ 0.12
ACTN1-215ENST00000555616 ARHGAP35Q9NRY4 1499 aa15.8■□□□□ 0.12
ACTN1-215ENST00000555616 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
ACTN1-215ENST00000555616 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
ACTN1-215ENST00000555616 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
ACTN1-215ENST00000555616 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
ACTN1-215ENST00000555616 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
ACTN1-215ENST00000555616 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
ACTN1-215ENST00000555616 CD109Q6YHK3 1445 aa15.75■□□□□ 0.11
ACTN1-215ENST00000555616 ABCA9Q8IUA7 1624 aa15.75■□□□□ 0.11
ACTN1-215ENST00000555616 COL17A1Q9UMD9 1497 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-215ENST00000555616 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
ACTN1-215ENST00000555616 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
ACTN1-215ENST00000555616 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
ACTN1-215ENST00000555616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-215ENST00000555616 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
ACTN1-215ENST00000555616 ARAP3Q8WWN8 1544 aa15.64■□□□□ 0.09
ACTN1-215ENST00000555616 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
ACTN1-215ENST00000555616 CLIP1P30622 1438 aa15.64■□□□□ 0.09
ACTN1-215ENST00000555616 PLEKHD1A6NEE1 506 aa15.63■□□□□ 0.09
ACTN1-215ENST00000555616 NEO1Q92859 1461 aa15.63■□□□□ 0.09
ACTN1-215ENST00000555616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.63■□□□□ 0.09
ACTN1-215ENST00000555616 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
ACTN1-215ENST00000555616 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
ACTN1-215ENST00000555616 CASKIN1Q8WXD9 1431 aa15.62■□□□□ 0.09
ACTN1-215ENST00000555616 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
ACTN1-215ENST00000555616 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
ACTN1-215ENST00000555616 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
ACTN1-215ENST00000555616 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.08
ACTN1-215ENST00000555616 TROQ12816 1431 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-215ENST00000555616 KDM4FA0A1W2PPD8 638 aa15.56■□□□□ 0.08
ACTN1-215ENST00000555616 FRMPD1Q5SYB0 1578 aa15.56■□□□□ 0.08
ACTN1-215ENST00000555616 KIF14Q15058 1648 aa15.56■□□□□ 0.08
ACTN1-215ENST00000555616 FANCAO15360 1455 aa15.55■□□□□ 0.08
ACTN1-215ENST00000555616 ATP1B4Q9UN42 357 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-215ENST00000555616 CDK11AQ9UQ88 783 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-215ENST00000555616 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
ACTN1-215ENST00000555616 PLCH2O75038 1416 aa15.52■□□□□ 0.08
ACTN1-215ENST00000555616 ADGRL1O94910 1474 aa15.52■□□□□ 0.07
ACTN1-215ENST00000555616 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
ACTN1-215ENST00000555616 MYO5CQ9NQX4 1742 aa15.5■□□□□ 0.07
ACTN1-215ENST00000555616 DENND4BO75064 1496 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-215ENST00000555616 RICTORQ6R327 1708 aa15.48■□□□□ 0.07
ACTN1-215ENST00000555616 ZMYM4Q5VZL5 1548 aa15.48■□□□□ 0.07
ACTN1-215ENST00000555616 RAPGEF3O95398 923 aa15.47■□□□□ 0.07
ACTN1-215ENST00000555616 ARHGEF40Q8TER5 1519 aa15.47■□□□□ 0.07
ACTN1-215ENST00000555616 POGZQ7Z3K3 1410 aa15.45■□□□□ 0.06
ACTN1-215ENST00000555616 PREX2Q70Z35 1606 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms