RNA–Protein interactions for RNA: ENST00000555611.5

CIPC-206, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4 BASIC

Gene CIPC, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-206ENST00000555611 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
CIPC-206ENST00000555611 ABCC9O60706 1549 aa24.32■■□□□ 1.48
CIPC-206ENST00000555611 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
CIPC-206ENST00000555611 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
CIPC-206ENST00000555611 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
CIPC-206ENST00000555611 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
CIPC-206ENST00000555611 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
CIPC-206ENST00000555611 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
CIPC-206ENST00000555611 NACADO15069 1562 aa21.92■■□□□ 1.1
CIPC-206ENST00000555611 CC2D2AQ9P2K1 1620 aa21.82■■□□□ 1.08
CIPC-206ENST00000555611 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
CIPC-206ENST00000555611 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
CIPC-206ENST00000555611 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
CIPC-206ENST00000555611 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
CIPC-206ENST00000555611 CUX2O14529 1486 aa21.63■■□□□ 1.05
CIPC-206ENST00000555611 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
CIPC-206ENST00000555611 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
CIPC-206ENST00000555611 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
CIPC-206ENST00000555611 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
CIPC-206ENST00000555611 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
CIPC-206ENST00000555611 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
CIPC-206ENST00000555611 OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
CIPC-206ENST00000555611 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
CIPC-206ENST00000555611 TRHP20396 242 aaPredicted RBP20.41■□□□□ 0.86
CIPC-206ENST00000555611 NESP48681 1621 aa20.4■□□□□ 0.86
CIPC-206ENST00000555611 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
CIPC-206ENST00000555611 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
CIPC-206ENST00000555611 BAZ1AQ9NRL2 1556 aaPredicted RBP20.27■□□□□ 0.84
CIPC-206ENST00000555611 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
CIPC-206ENST00000555611 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
CIPC-206ENST00000555611 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
CIPC-206ENST00000555611 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
CIPC-206ENST00000555611 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
CIPC-206ENST00000555611 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
CIPC-206ENST00000555611 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
CIPC-206ENST00000555611 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
CIPC-206ENST00000555611 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
CIPC-206ENST00000555611 ARHGEF11O15085 1522 aa20.02■□□□□ 0.79
CIPC-206ENST00000555611 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
CIPC-206ENST00000555611 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
CIPC-206ENST00000555611 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
CIPC-206ENST00000555611 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
CIPC-206ENST00000555611 WDR62O43379 1518 aa19.89■□□□□ 0.77
CIPC-206ENST00000555611 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
CIPC-206ENST00000555611 ARAP1Q96P48 1450 aa19.7■□□□□ 0.74
CIPC-206ENST00000555611 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
CIPC-206ENST00000555611 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
CIPC-206ENST00000555611 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
CIPC-206ENST00000555611 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
CIPC-206ENST00000555611 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
CIPC-206ENST00000555611 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
CIPC-206ENST00000555611 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
CIPC-206ENST00000555611 FBLN2P98095 1184 aa19.28■□□□□ 0.68
CIPC-206ENST00000555611 KDM4FA0A1W2PPD8 638 aa19.27■□□□□ 0.68
CIPC-206ENST00000555611 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
CIPC-206ENST00000555611 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
CIPC-206ENST00000555611 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
CIPC-206ENST00000555611 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
CIPC-206ENST00000555611 CHD1O14646 1710 aa19.14■□□□□ 0.66
CIPC-206ENST00000555611 SOCS7O14512 581 aa19.14■□□□□ 0.65
CIPC-206ENST00000555611 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
CIPC-206ENST00000555611 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
CIPC-206ENST00000555611 CFTRP13569 1480 aa19.03■□□□□ 0.64
CIPC-206ENST00000555611 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
CIPC-206ENST00000555611 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.632e-11■■■■□ 26
CIPC-206ENST00000555611 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
CIPC-206ENST00000555611 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
CIPC-206ENST00000555611 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
CIPC-206ENST00000555611 ILDR2Q71H61 639 aa18.9■□□□□ 0.62
CIPC-206ENST00000555611 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
CIPC-206ENST00000555611 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
CIPC-206ENST00000555611 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
CIPC-206ENST00000555611 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
CIPC-206ENST00000555611 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
CIPC-206ENST00000555611 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
CIPC-206ENST00000555611 KDM6BO15054 1643 aa18.76■□□□□ 0.59
CIPC-206ENST00000555611 KIF13AQ9H1H9 1805 aa18.76■□□□□ 0.59
CIPC-206ENST00000555611 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
CIPC-206ENST00000555611 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
CIPC-206ENST00000555611 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
CIPC-206ENST00000555611 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
CIPC-206ENST00000555611 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.57
CIPC-206ENST00000555611 ABCC10Q5T3U5 1492 aa18.64■□□□□ 0.57
CIPC-206ENST00000555611 MAGI1Q96QZ7 1491 aaPredicted RBP18.62■□□□□ 0.57
CIPC-206ENST00000555611 WIZO95785 1651 aa18.6■□□□□ 0.57
CIPC-206ENST00000555611 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
CIPC-206ENST00000555611 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
CIPC-206ENST00000555611 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
CIPC-206ENST00000555611 PRDM2Q13029 1718 aa18.52■□□□□ 0.55
CIPC-206ENST00000555611 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
CIPC-206ENST00000555611 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
CIPC-206ENST00000555611 SOGA1O94964 1423 aa18.48■□□□□ 0.55
CIPC-206ENST00000555611 DIP2BQ9P265 1576 aa18.47■□□□□ 0.55
CIPC-206ENST00000555611 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
CIPC-206ENST00000555611 MAPKBP1O60336 1514 aa18.41■□□□□ 0.54
CIPC-206ENST00000555611 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
CIPC-206ENST00000555611 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
CIPC-206ENST00000555611 TSPOAP1O95153 1857 aa18.34■□□□□ 0.53
CIPC-206ENST00000555611 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
CIPC-206ENST00000555611 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms