RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
KTN1-223ENST00000555573 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
KTN1-223ENST00000555573 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
KTN1-223ENST00000555573 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
KTN1-223ENST00000555573 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
KTN1-223ENST00000555573 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
KTN1-223ENST00000555573 LHX8Q68G74 356 aa11.35□□□□□ -0.59
KTN1-223ENST00000555573 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
KTN1-223ENST00000555573 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
KTN1-223ENST00000555573 CFAP44Q96MT7 982 aa11.32□□□□□ -0.6
KTN1-223ENST00000555573 HAX1O00165 279 aa11.31□□□□□ -0.6
KTN1-223ENST00000555573 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
KTN1-223ENST00000555573 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
KTN1-223ENST00000555573 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
KTN1-223ENST00000555573 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
KTN1-223ENST00000555573 PYGBP11216 843 aa11.29□□□□□ -0.6
KTN1-223ENST00000555573 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.68e-8■■■□□ 15.5
KTN1-223ENST00000555573 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
KTN1-223ENST00000555573 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
KTN1-223ENST00000555573 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
KTN1-223ENST00000555573 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
KTN1-223ENST00000555573 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.62
KTN1-223ENST00000555573 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.62
KTN1-223ENST00000555573 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
KTN1-223ENST00000555573 STK25O00506 426 aa11.19□□□□□ -0.62
KTN1-223ENST00000555573 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
KTN1-223ENST00000555573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
KTN1-223ENST00000555573 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
KTN1-223ENST00000555573 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
KTN1-223ENST00000555573 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
KTN1-223ENST00000555573 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
KTN1-223ENST00000555573 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
KTN1-223ENST00000555573 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
KTN1-223ENST00000555573 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
KTN1-223ENST00000555573 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
KTN1-223ENST00000555573 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
KTN1-223ENST00000555573 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
KTN1-223ENST00000555573 GTPBP6O43824 516 aaPredicted RBP11.09□□□□□ -0.63
KTN1-223ENST00000555573 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
KTN1-223ENST00000555573 PDAP1Q13442 181 aaKnown RBP11.04□□□□□ -0.64
KTN1-223ENST00000555573 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
KTN1-223ENST00000555573 MAP3K13O43283 966 aa11.01□□□□□ -0.65
KTN1-223ENST00000555573 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
KTN1-223ENST00000555573 IFNL1Q8IU54 200 aa11□□□□□ -0.65
KTN1-223ENST00000555573 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
KTN1-223ENST00000555573 PSEN1P49768 467 aa10.99□□□□□ -0.65
KTN1-223ENST00000555573 BCANQ96GW7 911 aa10.99□□□□□ -0.65
KTN1-223ENST00000555573 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
KTN1-223ENST00000555573 RYDENQ9NUL5 291 aaKnown RBP10.95□□□□□ -0.66
KTN1-223ENST00000555573 PHF12Q96QT6 1004 aa10.95□□□□□ -0.66
KTN1-223ENST00000555573 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
KTN1-223ENST00000555573 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
KTN1-223ENST00000555573 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
KTN1-223ENST00000555573 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
KTN1-223ENST00000555573 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
KTN1-223ENST00000555573 EVX2Q03828 476 aa10.84□□□□□ -0.67
KTN1-223ENST00000555573 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
KTN1-223ENST00000555573 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
KTN1-223ENST00000555573 CADPS2Q86UW7 1296 aa10.8□□□□□ -0.68
KTN1-223ENST00000555573 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
KTN1-223ENST00000555573 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
KTN1-223ENST00000555573 SOX12O15370 315 aa10.78□□□□□ -0.68
KTN1-223ENST00000555573 PPP1R37O75864 691 aa10.78□□□□□ -0.68
KTN1-223ENST00000555573 NLRP6P59044 892 aa10.78□□□□□ -0.68
KTN1-223ENST00000555573 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
KTN1-223ENST00000555573 POTEMA6NI47 508 aa10.75□□□□□ -0.69
KTN1-223ENST00000555573 PRKCSHP14314 528 aaPredicted RBP10.73□□□□□ -0.69
KTN1-223ENST00000555573 NBR1Q14596 966 aa10.73□□□□□ -0.69
KTN1-223ENST00000555573 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
KTN1-223ENST00000555573 MS4A4AQ96JQ5 239 aa10.7□□□□□ -0.7
KTN1-223ENST00000555573 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
KTN1-223ENST00000555573 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
KTN1-223ENST00000555573 TIE1P35590 1138 aa10.69□□□□□ -0.7
KTN1-223ENST00000555573 GABBR2O75899 941 aa10.67□□□□□ -0.7
KTN1-223ENST00000555573 BMP2KQ9NSY1 1161 aaPredicted RBP10.67□□□□□ -0.7
KTN1-223ENST00000555573 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
KTN1-223ENST00000555573 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
KTN1-223ENST00000555573 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.7
KTN1-223ENST00000555573 POTEGQ6S5H5 508 aa10.65□□□□□ -0.7
KTN1-223ENST00000555573 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
KTN1-223ENST00000555573 KCNV2Q8TDN2 545 aa10.62□□□□□ -0.71
KTN1-223ENST00000555573 TRIM35Q9UPQ4 493 aa10.61□□□□□ -0.71
KTN1-223ENST00000555573 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
KTN1-223ENST00000555573 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
KTN1-223ENST00000555573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■■□ 23
KTN1-223ENST00000555573 CLCN6P51797 869 aa10.58□□□□□ -0.72
KTN1-223ENST00000555573 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
KTN1-223ENST00000555573 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
KTN1-223ENST00000555573 PDE4AP27815 886 aa10.53□□□□□ -0.72
KTN1-223ENST00000555573 E2F4Q16254 413 aa10.53□□□□□ -0.72
KTN1-223ENST00000555573 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
KTN1-223ENST00000555573 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
KTN1-223ENST00000555573 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
KTN1-223ENST00000555573 MFSD10Q14728 455 aa10.5□□□□□ -0.73
KTN1-223ENST00000555573 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
KTN1-223ENST00000555573 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
KTN1-223ENST00000555573 ARHGEF1Q92888 912 aaKnown RBP10.49□□□□□ -0.73
KTN1-223ENST00000555573 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
KTN1-223ENST00000555573 IRX5P78411 483 aaPredicted RBP10.47□□□□□ -0.73
KTN1-223ENST00000555573 IER5LQ5T953 404 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms