RNA–Protein interactions for RNA: ENST00000555561.5

SDR39U1-213, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-213ENST00000555561 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
SDR39U1-213ENST00000555561 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
SDR39U1-213ENST00000555561 ABCC9O60706 1549 aa21.58■■□□□ 1.04
SDR39U1-213ENST00000555561 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
SDR39U1-213ENST00000555561 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
SDR39U1-213ENST00000555561 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
SDR39U1-213ENST00000555561 NACADO15069 1562 aa20.63■□□□□ 0.89
SDR39U1-213ENST00000555561 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
SDR39U1-213ENST00000555561 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
SDR39U1-213ENST00000555561 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
SDR39U1-213ENST00000555561 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
SDR39U1-213ENST00000555561 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
SDR39U1-213ENST00000555561 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.812e-8■□□□□ 11.2
SDR39U1-213ENST00000555561 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
SDR39U1-213ENST00000555561 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
SDR39U1-213ENST00000555561 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
SDR39U1-213ENST00000555561 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
SDR39U1-213ENST00000555561 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
SDR39U1-213ENST00000555561 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
SDR39U1-213ENST00000555561 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
SDR39U1-213ENST00000555561 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
SDR39U1-213ENST00000555561 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
SDR39U1-213ENST00000555561 EIF4G1Q04637 1599 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-213ENST00000555561 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
SDR39U1-213ENST00000555561 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
SDR39U1-213ENST00000555561 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
SDR39U1-213ENST00000555561 WIZO95785 1651 aa19.38■□□□□ 0.69
SDR39U1-213ENST00000555561 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
SDR39U1-213ENST00000555561 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
SDR39U1-213ENST00000555561 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
SDR39U1-213ENST00000555561 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
SDR39U1-213ENST00000555561 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
SDR39U1-213ENST00000555561 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
SDR39U1-213ENST00000555561 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
SDR39U1-213ENST00000555561 EEA1Q15075 1411 aa18.8■□□□□ 0.6
SDR39U1-213ENST00000555561 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
SDR39U1-213ENST00000555561 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
SDR39U1-213ENST00000555561 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
SDR39U1-213ENST00000555561 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
SDR39U1-213ENST00000555561 CFTRP13569 1480 aa18.6■□□□□ 0.57
SDR39U1-213ENST00000555561 NESP48681 1621 aa18.57■□□□□ 0.56
SDR39U1-213ENST00000555561 CUX2O14529 1486 aa18.56■□□□□ 0.56
SDR39U1-213ENST00000555561 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
SDR39U1-213ENST00000555561 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
SDR39U1-213ENST00000555561 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
SDR39U1-213ENST00000555561 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
SDR39U1-213ENST00000555561 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
SDR39U1-213ENST00000555561 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
SDR39U1-213ENST00000555561 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
SDR39U1-213ENST00000555561 KIF21BO75037 1637 aa18.41■□□□□ 0.54
SDR39U1-213ENST00000555561 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
SDR39U1-213ENST00000555561 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
SDR39U1-213ENST00000555561 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
SDR39U1-213ENST00000555561 TNIKQ9UKE5 1360 aa18.38■□□□□ 0.53
SDR39U1-213ENST00000555561 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
SDR39U1-213ENST00000555561 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
SDR39U1-213ENST00000555561 SOGA1O94964 1423 aa18.35■□□□□ 0.53
SDR39U1-213ENST00000555561 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
SDR39U1-213ENST00000555561 CUX1P39880 1505 aa18.29■□□□□ 0.52
SDR39U1-213ENST00000555561 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
SDR39U1-213ENST00000555561 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
SDR39U1-213ENST00000555561 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
SDR39U1-213ENST00000555561 TRIM26Q12899 539 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-213ENST00000555561 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
SDR39U1-213ENST00000555561 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
SDR39U1-213ENST00000555561 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
SDR39U1-213ENST00000555561 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
SDR39U1-213ENST00000555561 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
SDR39U1-213ENST00000555561 PRXQ9BXM0 1461 aa18.16■□□□□ 0.5
SDR39U1-213ENST00000555561 WDR62O43379 1518 aa18.13■□□□□ 0.49
SDR39U1-213ENST00000555561 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
SDR39U1-213ENST00000555561 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
SDR39U1-213ENST00000555561 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
SDR39U1-213ENST00000555561 ABCA10Q8WWZ4 1543 aa18.04■□□□□ 0.48
SDR39U1-213ENST00000555561 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
SDR39U1-213ENST00000555561 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
SDR39U1-213ENST00000555561 CLIP1P30622 1438 aa18.02■□□□□ 0.48
SDR39U1-213ENST00000555561 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
SDR39U1-213ENST00000555561 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
SDR39U1-213ENST00000555561 CUL7Q14999 1698 aa17.96■□□□□ 0.47
SDR39U1-213ENST00000555561 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
SDR39U1-213ENST00000555561 HRCP23327 699 aa17.93■□□□□ 0.46
SDR39U1-213ENST00000555561 IGF1RP08069 1367 aa17.92■□□□□ 0.46
SDR39U1-213ENST00000555561 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
SDR39U1-213ENST00000555561 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
SDR39U1-213ENST00000555561 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
SDR39U1-213ENST00000555561 ZEB1P37275 1124 aaPredicted RBP17.86■□□□□ 0.45
SDR39U1-213ENST00000555561 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.45
SDR39U1-213ENST00000555561 APLP2Q06481 763 aa17.8■□□□□ 0.44
SDR39U1-213ENST00000555561 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
SDR39U1-213ENST00000555561 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
SDR39U1-213ENST00000555561 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
SDR39U1-213ENST00000555561 MAP3K1Q13233 1512 aa17.77■□□□□ 0.43
SDR39U1-213ENST00000555561 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-213ENST00000555561 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
SDR39U1-213ENST00000555561 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
SDR39U1-213ENST00000555561 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
SDR39U1-213ENST00000555561 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
SDR39U1-213ENST00000555561 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
SDR39U1-213ENST00000555561 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms