RNA–Protein interactions for RNA: ENST00000555200.1

CIPC-204, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-204ENST00000555200 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
CIPC-204ENST00000555200 ABCC9O60706 1549 aa21.37■■□□□ 1.01
CIPC-204ENST00000555200 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
CIPC-204ENST00000555200 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
CIPC-204ENST00000555200 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
CIPC-204ENST00000555200 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
CIPC-204ENST00000555200 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
CIPC-204ENST00000555200 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
CIPC-204ENST00000555200 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
CIPC-204ENST00000555200 NACADO15069 1562 aa19.31■□□□□ 0.68
CIPC-204ENST00000555200 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
CIPC-204ENST00000555200 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
CIPC-204ENST00000555200 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
CIPC-204ENST00000555200 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
CIPC-204ENST00000555200 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
CIPC-204ENST00000555200 CUX2O14529 1486 aa18.87■□□□□ 0.61
CIPC-204ENST00000555200 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
CIPC-204ENST00000555200 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
CIPC-204ENST00000555200 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
CIPC-204ENST00000555200 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
CIPC-204ENST00000555200 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
CIPC-204ENST00000555200 NESP48681 1621 aa18.04■□□□□ 0.48
CIPC-204ENST00000555200 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
CIPC-204ENST00000555200 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
CIPC-204ENST00000555200 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
CIPC-204ENST00000555200 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
CIPC-204ENST00000555200 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
CIPC-204ENST00000555200 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
CIPC-204ENST00000555200 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
CIPC-204ENST00000555200 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
CIPC-204ENST00000555200 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
CIPC-204ENST00000555200 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
CIPC-204ENST00000555200 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
CIPC-204ENST00000555200 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
CIPC-204ENST00000555200 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
CIPC-204ENST00000555200 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
CIPC-204ENST00000555200 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
CIPC-204ENST00000555200 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
CIPC-204ENST00000555200 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
CIPC-204ENST00000555200 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
CIPC-204ENST00000555200 WDR62O43379 1518 aa17.53■□□□□ 0.4
CIPC-204ENST00000555200 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
CIPC-204ENST00000555200 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
CIPC-204ENST00000555200 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
CIPC-204ENST00000555200 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
CIPC-204ENST00000555200 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
CIPC-204ENST00000555200 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
CIPC-204ENST00000555200 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
CIPC-204ENST00000555200 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
CIPC-204ENST00000555200 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
CIPC-204ENST00000555200 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
CIPC-204ENST00000555200 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
CIPC-204ENST00000555200 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
CIPC-204ENST00000555200 CHD1O14646 1710 aa16.97■□□□□ 0.31
CIPC-204ENST00000555200 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
CIPC-204ENST00000555200 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
CIPC-204ENST00000555200 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
CIPC-204ENST00000555200 KDM4FA0A1W2PPD8 638 aa16.86■□□□□ 0.29
CIPC-204ENST00000555200 CFTRP13569 1480 aa16.82■□□□□ 0.28
CIPC-204ENST00000555200 FBLN2P98095 1184 aa16.8■□□□□ 0.28
CIPC-204ENST00000555200 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
CIPC-204ENST00000555200 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.272e-11■■■■□ 26
CIPC-204ENST00000555200 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
CIPC-204ENST00000555200 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
CIPC-204ENST00000555200 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
CIPC-204ENST00000555200 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
CIPC-204ENST00000555200 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
CIPC-204ENST00000555200 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
CIPC-204ENST00000555200 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
CIPC-204ENST00000555200 WIZO95785 1651 aa16.59■□□□□ 0.25
CIPC-204ENST00000555200 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
CIPC-204ENST00000555200 SYNJ1O43426 1573 aa16.58■□□□□ 0.24
CIPC-204ENST00000555200 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
CIPC-204ENST00000555200 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
CIPC-204ENST00000555200 SOCS7O14512 581 aa16.5■□□□□ 0.23
CIPC-204ENST00000555200 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
CIPC-204ENST00000555200 ILDR2Q71H61 639 aa16.46■□□□□ 0.23
CIPC-204ENST00000555200 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
CIPC-204ENST00000555200 KDM6BO15054 1643 aa16.43■□□□□ 0.22
CIPC-204ENST00000555200 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
CIPC-204ENST00000555200 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
CIPC-204ENST00000555200 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
CIPC-204ENST00000555200 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
CIPC-204ENST00000555200 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
CIPC-204ENST00000555200 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
CIPC-204ENST00000555200 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
CIPC-204ENST00000555200 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
CIPC-204ENST00000555200 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
CIPC-204ENST00000555200 DIP2BQ9P265 1576 aa16.29■□□□□ 0.2
CIPC-204ENST00000555200 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.2
CIPC-204ENST00000555200 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
CIPC-204ENST00000555200 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
CIPC-204ENST00000555200 SOGA1O94964 1423 aa16.25■□□□□ 0.19
CIPC-204ENST00000555200 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
CIPC-204ENST00000555200 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
CIPC-204ENST00000555200 TSPOAP1O95153 1857 aa16.21■□□□□ 0.19
CIPC-204ENST00000555200 MAPKBP1O60336 1514 aa16.18■□□□□ 0.18
CIPC-204ENST00000555200 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
CIPC-204ENST00000555200 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
CIPC-204ENST00000555200 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms