RNA–Protein interactions for RNA: ENST00000554799.1

GPATCH2L-206, Transcript of G-patch domain containing 2 like, humanhuman

TSL 5

Gene GPATCH2L, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-206ENST00000554799 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
GPATCH2L-206ENST00000554799 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
GPATCH2L-206ENST00000554799 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
GPATCH2L-206ENST00000554799 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
GPATCH2L-206ENST00000554799 ABCC9O60706 1549 aa19.79■□□□□ 0.76
GPATCH2L-206ENST00000554799 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
GPATCH2L-206ENST00000554799 NACADO15069 1562 aa18.95■□□□□ 0.62
GPATCH2L-206ENST00000554799 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
GPATCH2L-206ENST00000554799 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
GPATCH2L-206ENST00000554799 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
GPATCH2L-206ENST00000554799 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
GPATCH2L-206ENST00000554799 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
GPATCH2L-206ENST00000554799 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
GPATCH2L-206ENST00000554799 UNC13AQ9UPW8 1703 aa18.4■□□□□ 0.54
GPATCH2L-206ENST00000554799 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
GPATCH2L-206ENST00000554799 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
GPATCH2L-206ENST00000554799 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
GPATCH2L-206ENST00000554799 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
GPATCH2L-206ENST00000554799 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
GPATCH2L-206ENST00000554799 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
GPATCH2L-206ENST00000554799 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
GPATCH2L-206ENST00000554799 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
GPATCH2L-206ENST00000554799 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
GPATCH2L-206ENST00000554799 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
GPATCH2L-206ENST00000554799 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
GPATCH2L-206ENST00000554799 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
GPATCH2L-206ENST00000554799 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
GPATCH2L-206ENST00000554799 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
GPATCH2L-206ENST00000554799 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
GPATCH2L-206ENST00000554799 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
GPATCH2L-206ENST00000554799 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
GPATCH2L-206ENST00000554799 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
GPATCH2L-206ENST00000554799 WIZO95785 1651 aa17.22■□□□□ 0.35
GPATCH2L-206ENST00000554799 NESP48681 1621 aa17.11■□□□□ 0.33
GPATCH2L-206ENST00000554799 CADPSQ9ULU8 1353 aa17.05■□□□□ 0.32
GPATCH2L-206ENST00000554799 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
GPATCH2L-206ENST00000554799 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
GPATCH2L-206ENST00000554799 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
GPATCH2L-206ENST00000554799 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
GPATCH2L-206ENST00000554799 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
GPATCH2L-206ENST00000554799 CFTRP13569 1480 aa16.92■□□□□ 0.3
GPATCH2L-206ENST00000554799 CUX2O14529 1486 aa16.87■□□□□ 0.29
GPATCH2L-206ENST00000554799 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
GPATCH2L-206ENST00000554799 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
GPATCH2L-206ENST00000554799 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
GPATCH2L-206ENST00000554799 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
GPATCH2L-206ENST00000554799 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
GPATCH2L-206ENST00000554799 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
GPATCH2L-206ENST00000554799 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
GPATCH2L-206ENST00000554799 WDR62O43379 1518 aa16.68■□□□□ 0.26
GPATCH2L-206ENST00000554799 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
GPATCH2L-206ENST00000554799 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
GPATCH2L-206ENST00000554799 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
GPATCH2L-206ENST00000554799 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
GPATCH2L-206ENST00000554799 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
GPATCH2L-206ENST00000554799 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
GPATCH2L-206ENST00000554799 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
GPATCH2L-206ENST00000554799 FOXD1Q16676 465 aa16.41■□□□□ 0.22
GPATCH2L-206ENST00000554799 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
GPATCH2L-206ENST00000554799 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
GPATCH2L-206ENST00000554799 CUX1P39880 1505 aa16.37■□□□□ 0.21
GPATCH2L-206ENST00000554799 SOGA1O94964 1423 aa16.36■□□□□ 0.21
GPATCH2L-206ENST00000554799 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
GPATCH2L-206ENST00000554799 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
GPATCH2L-206ENST00000554799 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
GPATCH2L-206ENST00000554799 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.23e-7■■■■■ 30.5
GPATCH2L-206ENST00000554799 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
GPATCH2L-206ENST00000554799 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
GPATCH2L-206ENST00000554799 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
GPATCH2L-206ENST00000554799 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
GPATCH2L-206ENST00000554799 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
GPATCH2L-206ENST00000554799 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
GPATCH2L-206ENST00000554799 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
GPATCH2L-206ENST00000554799 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
GPATCH2L-206ENST00000554799 FBLN2P98095 1184 aa16.14■□□□□ 0.17
GPATCH2L-206ENST00000554799 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
GPATCH2L-206ENST00000554799 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
GPATCH2L-206ENST00000554799 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
GPATCH2L-206ENST00000554799 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
GPATCH2L-206ENST00000554799 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
GPATCH2L-206ENST00000554799 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
GPATCH2L-206ENST00000554799 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
GPATCH2L-206ENST00000554799 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
GPATCH2L-206ENST00000554799 IGF1RP08069 1367 aa15.97■□□□□ 0.15
GPATCH2L-206ENST00000554799 CHD1O14646 1710 aa15.97■□□□□ 0.15
GPATCH2L-206ENST00000554799 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
GPATCH2L-206ENST00000554799 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
GPATCH2L-206ENST00000554799 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
GPATCH2L-206ENST00000554799 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
GPATCH2L-206ENST00000554799 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
GPATCH2L-206ENST00000554799 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
GPATCH2L-206ENST00000554799 ARHGEF11O15085 1522 aa15.9■□□□□ 0.14
GPATCH2L-206ENST00000554799 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
GPATCH2L-206ENST00000554799 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
GPATCH2L-206ENST00000554799 NUP160Q12769 1436 aa15.88■□□□□ 0.13
GPATCH2L-206ENST00000554799 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
GPATCH2L-206ENST00000554799 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
GPATCH2L-206ENST00000554799 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
GPATCH2L-206ENST00000554799 CYB5RLQ6IPT4 315 aa15.86■□□□□ 0.13
GPATCH2L-206ENST00000554799 CARMIL1Q5VZK9 1371 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms