RNA–Protein interactions for RNA: ENST00000554744.1

SEL1L-203, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-203ENST00000554744 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SEL1L-203ENST00000554744 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
SEL1L-203ENST00000554744 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
SEL1L-203ENST00000554744 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
SEL1L-203ENST00000554744 FOXD1Q16676 465 aa18.11■□□□□ 0.49
SEL1L-203ENST00000554744 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
SEL1L-203ENST00000554744 MSH5O43196 834 aa17.27■□□□□ 0.36
SEL1L-203ENST00000554744 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
SEL1L-203ENST00000554744 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
SEL1L-203ENST00000554744 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
SEL1L-203ENST00000554744 ADRA2BP18089 450 aa16.37■□□□□ 0.21
SEL1L-203ENST00000554744 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
SEL1L-203ENST00000554744 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
SEL1L-203ENST00000554744 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
SEL1L-203ENST00000554744 MAPK8IP2Q13387 824 aaPredicted RBP15.21■□□□□ 0.03
SEL1L-203ENST00000554744 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
SEL1L-203ENST00000554744 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
SEL1L-203ENST00000554744 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
SEL1L-203ENST00000554744 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
SEL1L-203ENST00000554744 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
SEL1L-203ENST00000554744 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
SEL1L-203ENST00000554744 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
SEL1L-203ENST00000554744 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
SEL1L-203ENST00000554744 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
SEL1L-203ENST00000554744 POTEHQ6S545 545 aa13.92□□□□□ -0.18
SEL1L-203ENST00000554744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.193e-6■■□□□ 13.2
SEL1L-203ENST00000554744 CCDC180Q9P1Z9 1646 aa13.76□□□□□ -0.21
SEL1L-203ENST00000554744 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
SEL1L-203ENST00000554744 CAPN15O75808 1086 aa13.5□□□□□ -0.25
SEL1L-203ENST00000554744 DSG3P32926 999 aa13.49□□□□□ -0.25
SEL1L-203ENST00000554744 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
SEL1L-203ENST00000554744 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
SEL1L-203ENST00000554744 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
SEL1L-203ENST00000554744 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
SEL1L-203ENST00000554744 ABCC9O60706 1549 aa13.12□□□□□ -0.31
SEL1L-203ENST00000554744 ABCB7O75027 752 aa13.08□□□□□ -0.32
SEL1L-203ENST00000554744 APLP2Q06481 763 aa13.08□□□□□ -0.32
SEL1L-203ENST00000554744 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
SEL1L-203ENST00000554744 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
SEL1L-203ENST00000554744 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
SEL1L-203ENST00000554744 MYO15BQ96JP2 1530 aa12.95□□□□□ -0.34
SEL1L-203ENST00000554744 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
SEL1L-203ENST00000554744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
SEL1L-203ENST00000554744 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
SEL1L-203ENST00000554744 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
SEL1L-203ENST00000554744 NACADO15069 1562 aa12.89□□□□□ -0.35
SEL1L-203ENST00000554744 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
SEL1L-203ENST00000554744 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
SEL1L-203ENST00000554744 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
SEL1L-203ENST00000554744 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
SEL1L-203ENST00000554744 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
SEL1L-203ENST00000554744 POLA2Q14181 598 aa12.59□□□□□ -0.39
SEL1L-203ENST00000554744 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
SEL1L-203ENST00000554744 KCNA4P22459 653 aa12.48□□□□□ -0.41
SEL1L-203ENST00000554744 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
SEL1L-203ENST00000554744 SCRIBQ14160 1630 aa12.45□□□□□ -0.42
SEL1L-203ENST00000554744 HAX1O00165 279 aa12.45□□□□□ -0.42
SEL1L-203ENST00000554744 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
SEL1L-203ENST00000554744 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
SEL1L-203ENST00000554744 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
SEL1L-203ENST00000554744 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
SEL1L-203ENST00000554744 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
SEL1L-203ENST00000554744 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
SEL1L-203ENST00000554744 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEL1L-203ENST00000554744 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEL1L-203ENST00000554744 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
SEL1L-203ENST00000554744 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
SEL1L-203ENST00000554744 EVX2Q03828 476 aa12.12□□□□□ -0.47
SEL1L-203ENST00000554744 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
SEL1L-203ENST00000554744 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
SEL1L-203ENST00000554744 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
SEL1L-203ENST00000554744 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
SEL1L-203ENST00000554744 SMARCA4P51532 1647 aa12□□□□□ -0.49
SEL1L-203ENST00000554744 LHX8Q68G74 356 aa11.97□□□□□ -0.49
SEL1L-203ENST00000554744 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
SEL1L-203ENST00000554744 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
SEL1L-203ENST00000554744 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
SEL1L-203ENST00000554744 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
SEL1L-203ENST00000554744 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
SEL1L-203ENST00000554744 RSF1Q96T23 1441 aaPredicted RBP11.89□□□□□ -0.51
SEL1L-203ENST00000554744 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
SEL1L-203ENST00000554744 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
SEL1L-203ENST00000554744 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
SEL1L-203ENST00000554744 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
SEL1L-203ENST00000554744 GABBR2O75899 941 aa11.87□□□□□ -0.51
SEL1L-203ENST00000554744 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
SEL1L-203ENST00000554744 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
SEL1L-203ENST00000554744 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
SEL1L-203ENST00000554744 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
SEL1L-203ENST00000554744 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
SEL1L-203ENST00000554744 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
SEL1L-203ENST00000554744 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
SEL1L-203ENST00000554744 WIZO95785 1651 aa11.78□□□□□ -0.52
SEL1L-203ENST00000554744 BAZ1BQ9UIG0 1483 aaKnown RBP11.78□□□□□ -0.52
SEL1L-203ENST00000554744 FBLN2P98095 1184 aa11.76□□□□□ -0.53
SEL1L-203ENST00000554744 TOP2AP11388 1531 aaKnown RBP11.74□□□□□ -0.53
SEL1L-203ENST00000554744 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
SEL1L-203ENST00000554744 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
SEL1L-203ENST00000554744 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
SEL1L-203ENST00000554744 SUPT5HO00267 1087 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms