RNA–Protein interactions for RNA: ENST00000554669.5

LINC01578-203, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5 BASIC

Gene LINC01578, Length 578 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-203ENST00000554669 UPF1Q92900 1129 aaKnown RBP eCLIP40.34■■■■■ 4.052e-7■■■■■ 44.5
LINC01578-203ENST00000554669 PRPF4O43172 522 aaKnown RBP eCLIP27.45■■□□□ 1.982e-21■■■■■ 34.2
LINC01578-203ENST00000554669 TIA1P31483 386 aaKnown RBP eCLIP26.8■■□□□ 1.885e-7■■■■■ 31
LINC01578-203ENST00000554669 AQRO60306 1485 aaKnown RBP eCLIP50.74■■■■■ 5.712e-20■■■■■ 27.6
LINC01578-203ENST00000554669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.91■■■□□ 2.549e-8■■■■■ 27
LINC01578-203ENST00000554669 SF3B1O75533 1304 aaKnown RBP eCLIP31.33■■■□□ 2.614e-6■■■■□ 26.1
LINC01578-203ENST00000554669 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.87■■■■□ 3.018e-15■■■■□ 25.8
LINC01578-203ENST00000554669 CSTF2P33240 577 aaKnown RBP eCLIP28.09■■■□□ 2.093e-17■■■■□ 25
LINC01578-203ENST00000554669 NONOQ15233 471 aaKnown RBP eCLIP32.69■■■□□ 2.823e-10■■■■□ 20
LINC01578-203ENST00000554669 EFTUD2Q15029 972 aaKnown RBP eCLIP27.58■■■□□ 2.013e-10■■■■□ 19.7
LINC01578-203ENST00000554669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.19■■□□□ 1.464e-12■■■□□ 16.9
LINC01578-203ENST00000554669 DDX6P26196 483 aaKnown RBP eCLIP30.55■■■□□ 2.483e-7■■■□□ 16.7
LINC01578-203ENST00000554669 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.9■■■■□ 3.184e-7■■■□□ 16.7
LINC01578-203ENST00000554669 AARSP49588 968 aaKnown RBP eCLIP31.13■■■□□ 2.571e-8■■■□□ 15.5
LINC01578-203ENST00000554669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP46.46■■■■■ 5.036e-10■■■□□ 15.4
LINC01578-203ENST00000554669 DDX3XO00571 662 aaKnown RBP eCLIP29.71■■■□□ 2.352e-7■■■□□ 14.8
LINC01578-203ENST00000554669 SRSF9Q13242 221 aaKnown RBP eCLIP17.7■□□□□ 0.426e-8■■□□□ 14.3
LINC01578-203ENST00000554669 EWSR1Q01844 656 aaKnown RBP eCLIP21.23■□□□□ 0.993e-13■■□□□ 14
LINC01578-203ENST00000554669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP33.73■■■□□ 2.992e-8■■□□□ 14
LINC01578-203ENST00000554669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.82■■■■□ 3.163e-10■■□□□ 13.9
LINC01578-203ENST00000554669 AKAP1Q92667 903 aaKnown RBP eCLIP25.18■■□□□ 1.623e-7■■□□□ 13.7
LINC01578-203ENST00000554669 NCBP2P52298 156 aaKnown RBP eCLIP26.59■■□□□ 1.855e-11■■□□□ 13.5
LINC01578-203ENST00000554669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.49■■□□□ 1.991e-6■■□□□ 13.1
LINC01578-203ENST00000554669 AATFQ9NY61 560 aaKnown RBP eCLIP35■■■■□ 3.194e-10■■□□□ 12.9
LINC01578-203ENST00000554669 GTF2F1P35269 517 aaKnown RBP eCLIP31.71■■■□□ 2.677e-16■■□□□ 12.8
LINC01578-203ENST00000554669 U2AF1Q01081 240 aaKnown RBP eCLIP38.45■■■■□ 3.755e-14■■□□□ 12.7
LINC01578-203ENST00000554669 FMR1Q06787 632 aaKnown RBP eCLIP36.01■■■■□ 3.362e-9■■□□□ 12
LINC01578-203ENST00000554669 CDC40O60508 579 aaKnown RBP eCLIP26.4■■□□□ 1.826e-7■■□□□ 11.9
LINC01578-203ENST00000554669 FUSP35637 526 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■□□□ 11.8
LINC01578-203ENST00000554669 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.86■■□□□ 1.898e-11■■□□□ 11.5
LINC01578-203ENST00000554669 PHF6Q8IWS0 365 aaKnown RBP eCLIP32■■■□□ 2.711e-6■■□□□ 11.5
LINC01578-203ENST00000554669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.44■■■□□ 2.148e-9■■□□□ 11.4
LINC01578-203ENST00000554669 TIAL1Q01085 375 aaKnown RBP eCLIP27.73■■■□□ 2.035e-6■■□□□ 11.4
LINC01578-203ENST00000554669 SRSF1Q07955 248 aaKnown RBP eCLIP26.88■■□□□ 1.892e-7■□□□□ 11.3
LINC01578-203ENST00000554669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.07■■■■■ 4.658e-11■□□□□ 10.9
LINC01578-203ENST00000554669 U2AF2P26368 475 aaKnown RBP eCLIP32.37■■■□□ 2.773e-12■□□□□ 10.4
LINC01578-203ENST00000554669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.18■■■■□ 3.062e-17■□□□□ 10.4
LINC01578-203ENST00000554669 SND1Q7KZF4 910 aaKnown RBP eCLIP29.88■■■□□ 2.375e-8■□□□□ 10
LINC01578-203ENST00000554669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.97■■■■□ 3.834e-7■□□□□ 8.8
LINC01578-203ENST00000554669 METAP2P50579 478 aaKnown RBP eCLIP33.25■■■□□ 2.913e-7■□□□□ 8.8
LINC01578-203ENST00000554669 RBM22Q9NW64 420 aaKnown RBP eCLIP29.03■■■□□ 2.243e-6■□□□□ 8.8
LINC01578-203ENST00000554669 XRCC6P12956 609 aaKnown RBP eCLIP32.12■■■□□ 2.736e-7■□□□□ 8.7
LINC01578-203ENST00000554669 GPKOWQ92917 476 aaPredicted RBP eCLIP33.1■■■□□ 2.898e-11■□□□□ 8.7
LINC01578-203ENST00000554669 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.75■■■□□ 2.354e-16■□□□□ 8.7
LINC01578-203ENST00000554669 RBM15Q96T37 977 aaKnown RBP eCLIP28.83■■■□□ 2.214e-6■□□□□ 8.6
Retrieved 45 of 45 RNA–protein pairs in 10 ms