RNA–Protein interactions for RNA: ENST00000554521.6

NUMB-211, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-211ENST00000554521 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.77
NUMB-211ENST00000554521 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
NUMB-211ENST00000554521 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
NUMB-211ENST00000554521 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
NUMB-211ENST00000554521 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
NUMB-211ENST00000554521 FOXD1Q16676 465 aa20.58■□□□□ 0.88
NUMB-211ENST00000554521 ADRA2BP18089 450 aa19.84■□□□□ 0.77
NUMB-211ENST00000554521 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
NUMB-211ENST00000554521 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
NUMB-211ENST00000554521 MSH5O43196 834 aa19■□□□□ 0.63
NUMB-211ENST00000554521 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
NUMB-211ENST00000554521 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
NUMB-211ENST00000554521 KCNA4P22459 653 aa18■□□□□ 0.47
NUMB-211ENST00000554521 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
NUMB-211ENST00000554521 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
NUMB-211ENST00000554521 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
NUMB-211ENST00000554521 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
NUMB-211ENST00000554521 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
NUMB-211ENST00000554521 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
NUMB-211ENST00000554521 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
NUMB-211ENST00000554521 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
NUMB-211ENST00000554521 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
NUMB-211ENST00000554521 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
NUMB-211ENST00000554521 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.3
NUMB-211ENST00000554521 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
NUMB-211ENST00000554521 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
NUMB-211ENST00000554521 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
NUMB-211ENST00000554521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.253e-7■□□□□ 9.2
NUMB-211ENST00000554521 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
NUMB-211ENST00000554521 ZBTB22O15209 634 aa16.53■□□□□ 0.24
NUMB-211ENST00000554521 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.23
NUMB-211ENST00000554521 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
NUMB-211ENST00000554521 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
NUMB-211ENST00000554521 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
NUMB-211ENST00000554521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
NUMB-211ENST00000554521 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
NUMB-211ENST00000554521 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
NUMB-211ENST00000554521 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
NUMB-211ENST00000554521 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.15
NUMB-211ENST00000554521 APLP2Q06481 763 aa16.01■□□□□ 0.15
NUMB-211ENST00000554521 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
NUMB-211ENST00000554521 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
NUMB-211ENST00000554521 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
NUMB-211ENST00000554521 CAPN15O75808 1086 aa15.77■□□□□ 0.12
NUMB-211ENST00000554521 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
NUMB-211ENST00000554521 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
NUMB-211ENST00000554521 DSG3P32926 999 aa15.5■□□□□ 0.07
NUMB-211ENST00000554521 ABCB7O75027 752 aa15.47■□□□□ 0.07
NUMB-211ENST00000554521 POLA2Q14181 598 aa15.47■□□□□ 0.07
NUMB-211ENST00000554521 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
NUMB-211ENST00000554521 FBLN2P98095 1184 aa15.22■□□□□ 0.03
NUMB-211ENST00000554521 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
NUMB-211ENST00000554521 FKBP8Q14318 412 aa14.93□□□□□ -0.02
NUMB-211ENST00000554521 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
NUMB-211ENST00000554521 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
NUMB-211ENST00000554521 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
NUMB-211ENST00000554521 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
NUMB-211ENST00000554521 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
NUMB-211ENST00000554521 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.03
NUMB-211ENST00000554521 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
NUMB-211ENST00000554521 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
NUMB-211ENST00000554521 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
NUMB-211ENST00000554521 PROM2Q8N271 834 aa14.64□□□□□ -0.07
NUMB-211ENST00000554521 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
NUMB-211ENST00000554521 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
NUMB-211ENST00000554521 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
NUMB-211ENST00000554521 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
NUMB-211ENST00000554521 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
NUMB-211ENST00000554521 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
NUMB-211ENST00000554521 ABCC9O60706 1549 aa14.35□□□□□ -0.11
NUMB-211ENST00000554521 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
NUMB-211ENST00000554521 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
NUMB-211ENST00000554521 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
NUMB-211ENST00000554521 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
NUMB-211ENST00000554521 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
NUMB-211ENST00000554521 MIER1Q8N108 512 aa14.1□□□□□ -0.15
NUMB-211ENST00000554521 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
NUMB-211ENST00000554521 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
NUMB-211ENST00000554521 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.16
NUMB-211ENST00000554521 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
NUMB-211ENST00000554521 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
NUMB-211ENST00000554521 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
NUMB-211ENST00000554521 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
NUMB-211ENST00000554521 KLHL34Q8N239 644 aa13.96□□□□□ -0.18
NUMB-211ENST00000554521 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.18
NUMB-211ENST00000554521 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
NUMB-211ENST00000554521 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
NUMB-211ENST00000554521 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
NUMB-211ENST00000554521 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
NUMB-211ENST00000554521 NACADO15069 1562 aa13.86□□□□□ -0.19
NUMB-211ENST00000554521 SPOCK2Q92563 424 aa13.85□□□□□ -0.19
NUMB-211ENST00000554521 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
NUMB-211ENST00000554521 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
NUMB-211ENST00000554521 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
NUMB-211ENST00000554521 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
NUMB-211ENST00000554521 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
NUMB-211ENST00000554521 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
NUMB-211ENST00000554521 NUBP1P53384 320 aa13.73□□□□□ -0.21
NUMB-211ENST00000554521 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
NUMB-211ENST00000554521 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms