RNA–Protein interactions for RNA: ENST00000554447.5

CIPC-202, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4

Gene CIPC, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-202ENST00000554447 NISCHQ9Y2I1 1504 aa29.89■■■□□ 2.38
CIPC-202ENST00000554447 ABCC9O60706 1549 aa26.9■■□□□ 1.9
CIPC-202ENST00000554447 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
CIPC-202ENST00000554447 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
CIPC-202ENST00000554447 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
CIPC-202ENST00000554447 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
CIPC-202ENST00000554447 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
CIPC-202ENST00000554447 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
CIPC-202ENST00000554447 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
CIPC-202ENST00000554447 NACADO15069 1562 aa24.78■■□□□ 1.56
CIPC-202ENST00000554447 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
CIPC-202ENST00000554447 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
CIPC-202ENST00000554447 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
CIPC-202ENST00000554447 DNAJC5Q9H3Z4 198 aa24.35■■□□□ 1.49
CIPC-202ENST00000554447 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
CIPC-202ENST00000554447 CC2D2AQ9P2K1 1620 aa24.23■■□□□ 1.47
CIPC-202ENST00000554447 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
CIPC-202ENST00000554447 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
CIPC-202ENST00000554447 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
CIPC-202ENST00000554447 CUX2O14529 1486 aa23.43■■□□□ 1.34
CIPC-202ENST00000554447 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
CIPC-202ENST00000554447 BAZ1AQ9NRL2 1556 aaPredicted RBP23.16■■□□□ 1.3
CIPC-202ENST00000554447 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
CIPC-202ENST00000554447 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
CIPC-202ENST00000554447 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
CIPC-202ENST00000554447 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
CIPC-202ENST00000554447 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
CIPC-202ENST00000554447 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
CIPC-202ENST00000554447 NESP48681 1621 aa22.89■■□□□ 1.25
CIPC-202ENST00000554447 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
CIPC-202ENST00000554447 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
CIPC-202ENST00000554447 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
CIPC-202ENST00000554447 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
CIPC-202ENST00000554447 WIZO95785 1651 aa22.72■■□□□ 1.23
CIPC-202ENST00000554447 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
CIPC-202ENST00000554447 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
CIPC-202ENST00000554447 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
CIPC-202ENST00000554447 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
CIPC-202ENST00000554447 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
CIPC-202ENST00000554447 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
CIPC-202ENST00000554447 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
CIPC-202ENST00000554447 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
CIPC-202ENST00000554447 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
CIPC-202ENST00000554447 WDR62O43379 1518 aa22.24■■□□□ 1.15
CIPC-202ENST00000554447 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
CIPC-202ENST00000554447 CFTRP13569 1480 aa22.14■■□□□ 1.13
CIPC-202ENST00000554447 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
CIPC-202ENST00000554447 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
CIPC-202ENST00000554447 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
CIPC-202ENST00000554447 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
CIPC-202ENST00000554447 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
CIPC-202ENST00000554447 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
CIPC-202ENST00000554447 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
CIPC-202ENST00000554447 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
CIPC-202ENST00000554447 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
CIPC-202ENST00000554447 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
CIPC-202ENST00000554447 URB2Q14146 1524 aaKnown RBP21.83■■□□□ 1.09
CIPC-202ENST00000554447 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
CIPC-202ENST00000554447 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
CIPC-202ENST00000554447 ARAP1Q96P48 1450 aa21.64■■□□□ 1.06
CIPC-202ENST00000554447 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
CIPC-202ENST00000554447 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
CIPC-202ENST00000554447 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
CIPC-202ENST00000554447 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
CIPC-202ENST00000554447 CHD1O14646 1710 aa21.58■■□□□ 1.04
CIPC-202ENST00000554447 CUX1P39880 1505 aa21.55■■□□□ 1.04
CIPC-202ENST00000554447 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
CIPC-202ENST00000554447 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
CIPC-202ENST00000554447 FBLN2P98095 1184 aa21.5■■□□□ 1.03
CIPC-202ENST00000554447 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
CIPC-202ENST00000554447 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
CIPC-202ENST00000554447 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
CIPC-202ENST00000554447 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.022e-11■■■■□ 26
CIPC-202ENST00000554447 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
CIPC-202ENST00000554447 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
CIPC-202ENST00000554447 SOGA1O94964 1423 aa21.36■■□□□ 1.01
CIPC-202ENST00000554447 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
CIPC-202ENST00000554447 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
CIPC-202ENST00000554447 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
CIPC-202ENST00000554447 WDR97A6NE52 1622 aa21.27■■□□□ 1
CIPC-202ENST00000554447 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
CIPC-202ENST00000554447 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
CIPC-202ENST00000554447 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
CIPC-202ENST00000554447 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
CIPC-202ENST00000554447 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
CIPC-202ENST00000554447 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
CIPC-202ENST00000554447 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
CIPC-202ENST00000554447 EEA1Q15075 1411 aa21.09■□□□□ 0.97
CIPC-202ENST00000554447 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
CIPC-202ENST00000554447 ERICH3Q5RHP9 1530 aa21.05■□□□□ 0.96
CIPC-202ENST00000554447 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
CIPC-202ENST00000554447 IGF1RP08069 1367 aa20.99■□□□□ 0.95
CIPC-202ENST00000554447 ILDR1Q86SU0 546 aaPredicted RBP20.99■□□□□ 0.95
CIPC-202ENST00000554447 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
CIPC-202ENST00000554447 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
CIPC-202ENST00000554447 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
CIPC-202ENST00000554447 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
CIPC-202ENST00000554447 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
CIPC-202ENST00000554447 CUL7Q14999 1698 aa20.92■□□□□ 0.94
CIPC-202ENST00000554447 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms