RNA–Protein interactions for RNA: ENST00000554248.2

AC009779.4-201, humanhuman

BASIC

Gene AC009779.4, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009779.4-201ENST00000554248 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
AC009779.4-201ENST00000554248 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
AC009779.4-201ENST00000554248 ABCC9O60706 1549 aa16.06■□□□□ 0.16
AC009779.4-201ENST00000554248 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
AC009779.4-201ENST00000554248 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
AC009779.4-201ENST00000554248 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
AC009779.4-201ENST00000554248 NACADO15069 1562 aa15.66■□□□□ 0.1
AC009779.4-201ENST00000554248 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
AC009779.4-201ENST00000554248 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.09
AC009779.4-201ENST00000554248 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
AC009779.4-201ENST00000554248 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
AC009779.4-201ENST00000554248 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
AC009779.4-201ENST00000554248 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
AC009779.4-201ENST00000554248 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
AC009779.4-201ENST00000554248 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
AC009779.4-201ENST00000554248 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
AC009779.4-201ENST00000554248 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
AC009779.4-201ENST00000554248 SMARCA4P51532 1647 aa14.71□□□□□ -0.05
AC009779.4-201ENST00000554248 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
AC009779.4-201ENST00000554248 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
AC009779.4-201ENST00000554248 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
AC009779.4-201ENST00000554248 WIZO95785 1651 aa14.61□□□□□ -0.07
AC009779.4-201ENST00000554248 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
AC009779.4-201ENST00000554248 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
AC009779.4-201ENST00000554248 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
AC009779.4-201ENST00000554248 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
AC009779.4-201ENST00000554248 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
AC009779.4-201ENST00000554248 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
AC009779.4-201ENST00000554248 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
AC009779.4-201ENST00000554248 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
AC009779.4-201ENST00000554248 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
AC009779.4-201ENST00000554248 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
AC009779.4-201ENST00000554248 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
AC009779.4-201ENST00000554248 CFTRP13569 1480 aa14.05□□□□□ -0.16
AC009779.4-201ENST00000554248 NESP48681 1621 aa14.03□□□□□ -0.16
AC009779.4-201ENST00000554248 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
AC009779.4-201ENST00000554248 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
AC009779.4-201ENST00000554248 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
AC009779.4-201ENST00000554248 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
AC009779.4-201ENST00000554248 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
AC009779.4-201ENST00000554248 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.19
AC009779.4-201ENST00000554248 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
AC009779.4-201ENST00000554248 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
AC009779.4-201ENST00000554248 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
AC009779.4-201ENST00000554248 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
AC009779.4-201ENST00000554248 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
AC009779.4-201ENST00000554248 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
AC009779.4-201ENST00000554248 CUX1P39880 1505 aa13.78□□□□□ -0.2
AC009779.4-201ENST00000554248 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
AC009779.4-201ENST00000554248 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
AC009779.4-201ENST00000554248 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
AC009779.4-201ENST00000554248 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
AC009779.4-201ENST00000554248 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
AC009779.4-201ENST00000554248 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
AC009779.4-201ENST00000554248 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
AC009779.4-201ENST00000554248 WDR62O43379 1518 aa13.67□□□□□ -0.22
AC009779.4-201ENST00000554248 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
AC009779.4-201ENST00000554248 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
AC009779.4-201ENST00000554248 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
AC009779.4-201ENST00000554248 SOGA1O94964 1423 aa13.6□□□□□ -0.23
AC009779.4-201ENST00000554248 CUX2O14529 1486 aa13.57□□□□□ -0.24
AC009779.4-201ENST00000554248 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
AC009779.4-201ENST00000554248 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
AC009779.4-201ENST00000554248 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
AC009779.4-201ENST00000554248 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
AC009779.4-201ENST00000554248 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
AC009779.4-201ENST00000554248 IFT140Q96RY7 1462 aa13.52□□□□□ -0.25
AC009779.4-201ENST00000554248 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
AC009779.4-201ENST00000554248 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
AC009779.4-201ENST00000554248 EEA1Q15075 1411 aa13.48□□□□□ -0.25
AC009779.4-201ENST00000554248 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
AC009779.4-201ENST00000554248 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
AC009779.4-201ENST00000554248 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC009779.4-201ENST00000554248 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
AC009779.4-201ENST00000554248 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
AC009779.4-201ENST00000554248 IGF1RP08069 1367 aa13.43□□□□□ -0.26
AC009779.4-201ENST00000554248 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
AC009779.4-201ENST00000554248 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
AC009779.4-201ENST00000554248 LOC105371045A0A1W2PR82 267 aa13.39□□□□□ -0.27
AC009779.4-201ENST00000554248 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
AC009779.4-201ENST00000554248 ERICH3Q5RHP9 1530 aa13.38□□□□□ -0.27
AC009779.4-201ENST00000554248 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
AC009779.4-201ENST00000554248 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
AC009779.4-201ENST00000554248 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
AC009779.4-201ENST00000554248 KIF21BO75037 1637 aa13.34□□□□□ -0.27
AC009779.4-201ENST00000554248 CUL7Q14999 1698 aa13.34□□□□□ -0.27
AC009779.4-201ENST00000554248 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
AC009779.4-201ENST00000554248 RAPGEF2Q9Y4G8 1499 aa13.31□□□□□ -0.28
AC009779.4-201ENST00000554248 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
AC009779.4-201ENST00000554248 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
AC009779.4-201ENST00000554248 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
AC009779.4-201ENST00000554248 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
AC009779.4-201ENST00000554248 MAGI1Q96QZ7 1491 aaPredicted RBP13.28□□□□□ -0.28
AC009779.4-201ENST00000554248 FBLN2P98095 1184 aa13.23□□□□□ -0.29
AC009779.4-201ENST00000554248 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
AC009779.4-201ENST00000554248 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
AC009779.4-201ENST00000554248 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
AC009779.4-201ENST00000554248 CHD1O14646 1710 aa13.21□□□□□ -0.3
AC009779.4-201ENST00000554248 GRIN2AQ12879 1464 aa13.2□□□□□ -0.3
AC009779.4-201ENST00000554248 CTTNBP2Q8WZ74 1663 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms