RNA–Protein interactions for RNA: ENST00000554056.5

PNP-204, Transcript of purine nucleoside phosphorylase, humanhuman

TSL 5

Gene PNP, Length 1,635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNP-204ENST00000554056 DDX3XO00571 662 aaKnown RBP eCLIP11.06□□□□□ -0.642e-22■■□□□ 14.2
PNP-204ENST00000554056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.56□□□□□ -0.566e-16■■■■■ 89.4
PNP-204ENST00000554056 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.073e-12■■□□□ 13
PNP-204ENST00000554056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.02□□□□□ -0.649e-11■□□□□ 9.3
PNP-204ENST00000554056 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.462e-10■□□□□ 10
PNP-204ENST00000554056 RPS3P23396 243 aaKnown RBP eCLIP10.58□□□□□ -0.723e-10■■■■■ 34.6
PNP-204ENST00000554056 SF3B4Q15427 424 aaKnown RBP eCLIP10.09□□□□□ -0.794e-9■■■□□ 18
PNP-204ENST00000554056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.33□□□□□ -0.764e-9■■□□□ 12.5
PNP-204ENST00000554056 PABPC4Q13310 644 aaKnown RBP eCLIP13.35□□□□□ -0.271e-8■□□□□ 10.6
PNP-204ENST00000554056 SF3B1O75533 1304 aaKnown RBP eCLIP12.07□□□□□ -0.481e-8■■■■■ 103.4
PNP-204ENST00000554056 ZRANB2O95218 330 aaKnown RBP eCLIP10.86□□□□□ -0.672e-8■□□□□ 11.3
PNP-204ENST00000554056 YBX3P16989 372 aaKnown RBP eCLIP14.69□□□□□ -0.062e-8■□□□□ 8.8
PNP-204ENST00000554056 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.372e-8■■■□□ 17
PNP-204ENST00000554056 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.65e-8■□□□□ 11.3
PNP-204ENST00000554056 PCBP1Q15365 356 aaKnown RBP eCLIP12.26□□□□□ -0.455e-8■■■■□ 26.2
PNP-204ENST00000554056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.36e-8■■■□□ 18.8
PNP-204ENST00000554056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.417e-8■■■■□ 22.1
PNP-204ENST00000554056 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.738e-7■■■□□ 18.7
PNP-204ENST00000554056 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.86□□□□□ -0.679e-7■■■□□ 18.4
PNP-204ENST00000554056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 31
PNP-204ENST00000554056 EFTUD2Q15029 972 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■■■■■ 52.3
PNP-204ENST00000554056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.81□□□□□ -0.683e-6■□□□□ 10.3
PNP-204ENST00000554056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.463e-6■■□□□ 12.6
PNP-204ENST00000554056 G3BP1Q13283 466 aaKnown RBP eCLIP13.55□□□□□ -0.248e-6■■■■□ 20.2
PNP-204ENST00000554056 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.321e-5■■■■■ 50
Retrieved 25 of 25 RNA–protein pairs in 6.6 ms