RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 NISCHQ9Y2I1 1504 aa32.32■■■□□ 2.76
AF111169.3-201ENST00000553991 ABCC9O60706 1549 aa29.86■■■□□ 2.37
AF111169.3-201ENST00000553991 CCDC180Q9P1Z9 1646 aa29.22■■■□□ 2.27
AF111169.3-201ENST00000553991 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
AF111169.3-201ENST00000553991 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
AF111169.3-201ENST00000553991 NACADO15069 1562 aa27.83■■■□□ 2.05
AF111169.3-201ENST00000553991 PABPN1Q86U42 306 aaKnown RBP eCLIP27.72■■■□□ 2.03
AF111169.3-201ENST00000553991 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
AF111169.3-201ENST00000553991 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
AF111169.3-201ENST00000553991 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
AF111169.3-201ENST00000553991 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
AF111169.3-201ENST00000553991 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
AF111169.3-201ENST00000553991 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
AF111169.3-201ENST00000553991 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
AF111169.3-201ENST00000553991 DNAJC5Q9H3Z4 198 aa26.74■■□□□ 1.87
AF111169.3-201ENST00000553991 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
AF111169.3-201ENST00000553991 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.86
AF111169.3-201ENST00000553991 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
AF111169.3-201ENST00000553991 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
AF111169.3-201ENST00000553991 CUX2O14529 1486 aa26.04■■□□□ 1.76
AF111169.3-201ENST00000553991 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
AF111169.3-201ENST00000553991 NCAPD3P42695 1498 aa25.73■■□□□ 1.71
AF111169.3-201ENST00000553991 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
AF111169.3-201ENST00000553991 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
AF111169.3-201ENST00000553991 NESP48681 1621 aa25.45■■□□□ 1.67
AF111169.3-201ENST00000553991 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
AF111169.3-201ENST00000553991 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
AF111169.3-201ENST00000553991 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
AF111169.3-201ENST00000553991 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
AF111169.3-201ENST00000553991 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
AF111169.3-201ENST00000553991 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
AF111169.3-201ENST00000553991 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
AF111169.3-201ENST00000553991 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
AF111169.3-201ENST00000553991 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
AF111169.3-201ENST00000553991 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
AF111169.3-201ENST00000553991 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
AF111169.3-201ENST00000553991 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
AF111169.3-201ENST00000553991 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
AF111169.3-201ENST00000553991 WDR62O43379 1518 aa24.87■■□□□ 1.57
AF111169.3-201ENST00000553991 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
AF111169.3-201ENST00000553991 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
AF111169.3-201ENST00000553991 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
AF111169.3-201ENST00000553991 CFTRP13569 1480 aa24.5■■□□□ 1.51
AF111169.3-201ENST00000553991 WIZO95785 1651 aa24.48■■□□□ 1.51
AF111169.3-201ENST00000553991 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
AF111169.3-201ENST00000553991 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
AF111169.3-201ENST00000553991 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
AF111169.3-201ENST00000553991 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
AF111169.3-201ENST00000553991 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
AF111169.3-201ENST00000553991 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
AF111169.3-201ENST00000553991 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
AF111169.3-201ENST00000553991 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
AF111169.3-201ENST00000553991 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
AF111169.3-201ENST00000553991 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
AF111169.3-201ENST00000553991 TRHP20396 242 aaPredicted RBP24.13■■□□□ 1.45
AF111169.3-201ENST00000553991 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
AF111169.3-201ENST00000553991 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
AF111169.3-201ENST00000553991 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
AF111169.3-201ENST00000553991 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
AF111169.3-201ENST00000553991 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
AF111169.3-201ENST00000553991 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
AF111169.3-201ENST00000553991 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
AF111169.3-201ENST00000553991 FBLN2P98095 1184 aa23.92■■□□□ 1.42
AF111169.3-201ENST00000553991 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
AF111169.3-201ENST00000553991 CHD1O14646 1710 aa23.9■■□□□ 1.42
AF111169.3-201ENST00000553991 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
AF111169.3-201ENST00000553991 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
AF111169.3-201ENST00000553991 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
AF111169.3-201ENST00000553991 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
AF111169.3-201ENST00000553991 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
AF111169.3-201ENST00000553991 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
AF111169.3-201ENST00000553991 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
AF111169.3-201ENST00000553991 SOGA1O94964 1423 aa23.68■■□□□ 1.38
AF111169.3-201ENST00000553991 CHMP7Q8WUX9 453 aaPredicted RBP23.67■■□□□ 1.38
AF111169.3-201ENST00000553991 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
AF111169.3-201ENST00000553991 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
AF111169.3-201ENST00000553991 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
AF111169.3-201ENST00000553991 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
AF111169.3-201ENST00000553991 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
AF111169.3-201ENST00000553991 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
AF111169.3-201ENST00000553991 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
AF111169.3-201ENST00000553991 CUX1P39880 1505 aa23.42■■□□□ 1.34
AF111169.3-201ENST00000553991 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
AF111169.3-201ENST00000553991 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
AF111169.3-201ENST00000553991 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
AF111169.3-201ENST00000553991 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
AF111169.3-201ENST00000553991 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
AF111169.3-201ENST00000553991 NUP160Q12769 1436 aa23.21■■□□□ 1.31
AF111169.3-201ENST00000553991 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
AF111169.3-201ENST00000553991 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
AF111169.3-201ENST00000553991 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
AF111169.3-201ENST00000553991 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
AF111169.3-201ENST00000553991 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.28
AF111169.3-201ENST00000553991 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
AF111169.3-201ENST00000553991 FAM69CQ0P6D2 419 aa23.03■■□□□ 1.28
AF111169.3-201ENST00000553991 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
AF111169.3-201ENST00000553991 ABCC10Q5T3U5 1492 aa23.01■■□□□ 1.27
AF111169.3-201ENST00000553991 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
AF111169.3-201ENST00000553991 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
AF111169.3-201ENST00000553991 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms