RNA–Protein interactions for RNA: ENST00000553758.1

AF111169.2-201, humanhuman

TSL 3 BASIC

Gene AF111169.2, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.2-201ENST00000553758 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
AF111169.2-201ENST00000553758 ABCC9O60706 1549 aa30.47■■■□□ 2.47
AF111169.2-201ENST00000553758 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
AF111169.2-201ENST00000553758 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
AF111169.2-201ENST00000553758 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
AF111169.2-201ENST00000553758 NACADO15069 1562 aa28.34■■■□□ 2.13
AF111169.2-201ENST00000553758 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
AF111169.2-201ENST00000553758 UNC13AQ9UPW8 1703 aa28.16■■■□□ 2.1
AF111169.2-201ENST00000553758 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
AF111169.2-201ENST00000553758 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
AF111169.2-201ENST00000553758 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
AF111169.2-201ENST00000553758 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
AF111169.2-201ENST00000553758 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
AF111169.2-201ENST00000553758 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
AF111169.2-201ENST00000553758 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
AF111169.2-201ENST00000553758 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
AF111169.2-201ENST00000553758 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
AF111169.2-201ENST00000553758 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
AF111169.2-201ENST00000553758 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
AF111169.2-201ENST00000553758 CUX2O14529 1486 aa26.45■■□□□ 1.82
AF111169.2-201ENST00000553758 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
AF111169.2-201ENST00000553758 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
AF111169.2-201ENST00000553758 ATAD2BQ9ULI0 1458 aa26.03■■□□□ 1.76
AF111169.2-201ENST00000553758 NESP48681 1621 aa26.03■■□□□ 1.76
AF111169.2-201ENST00000553758 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
AF111169.2-201ENST00000553758 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
AF111169.2-201ENST00000553758 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
AF111169.2-201ENST00000553758 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
AF111169.2-201ENST00000553758 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
AF111169.2-201ENST00000553758 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
AF111169.2-201ENST00000553758 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
AF111169.2-201ENST00000553758 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
AF111169.2-201ENST00000553758 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
AF111169.2-201ENST00000553758 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
AF111169.2-201ENST00000553758 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
AF111169.2-201ENST00000553758 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
AF111169.2-201ENST00000553758 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.65
AF111169.2-201ENST00000553758 WDR62O43379 1518 aa25.37■■□□□ 1.65
AF111169.2-201ENST00000553758 CADPSQ9ULU8 1353 aa25.33■■□□□ 1.65
AF111169.2-201ENST00000553758 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
AF111169.2-201ENST00000553758 WIZO95785 1651 aa25.13■■□□□ 1.61
AF111169.2-201ENST00000553758 OSCARQ8IYS5 282 aa25.11■■□□□ 1.61
AF111169.2-201ENST00000553758 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
AF111169.2-201ENST00000553758 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
AF111169.2-201ENST00000553758 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
AF111169.2-201ENST00000553758 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
AF111169.2-201ENST00000553758 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.58
AF111169.2-201ENST00000553758 CFTRP13569 1480 aa24.94■■□□□ 1.58
AF111169.2-201ENST00000553758 ARHGEF11O15085 1522 aa24.79■■□□□ 1.56
AF111169.2-201ENST00000553758 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
AF111169.2-201ENST00000553758 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
AF111169.2-201ENST00000553758 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
AF111169.2-201ENST00000553758 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
AF111169.2-201ENST00000553758 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
AF111169.2-201ENST00000553758 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
AF111169.2-201ENST00000553758 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
AF111169.2-201ENST00000553758 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
AF111169.2-201ENST00000553758 CHD1O14646 1710 aa24.55■■□□□ 1.52
AF111169.2-201ENST00000553758 TRHP20396 242 aaPredicted RBP24.52■■□□□ 1.52
AF111169.2-201ENST00000553758 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
AF111169.2-201ENST00000553758 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
AF111169.2-201ENST00000553758 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
AF111169.2-201ENST00000553758 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
AF111169.2-201ENST00000553758 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
AF111169.2-201ENST00000553758 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
AF111169.2-201ENST00000553758 FBLN2P98095 1184 aa24.35■■□□□ 1.49
AF111169.2-201ENST00000553758 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
AF111169.2-201ENST00000553758 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
AF111169.2-201ENST00000553758 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
AF111169.2-201ENST00000553758 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
AF111169.2-201ENST00000553758 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
AF111169.2-201ENST00000553758 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
AF111169.2-201ENST00000553758 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
AF111169.2-201ENST00000553758 SOGA1O94964 1423 aa24.1■■□□□ 1.45
AF111169.2-201ENST00000553758 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
AF111169.2-201ENST00000553758 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
AF111169.2-201ENST00000553758 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
AF111169.2-201ENST00000553758 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
AF111169.2-201ENST00000553758 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
AF111169.2-201ENST00000553758 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
AF111169.2-201ENST00000553758 GAPVD1Q14C86 1478 aa23.96■■□□□ 1.43
AF111169.2-201ENST00000553758 CUX1P39880 1505 aa23.93■■□□□ 1.42
AF111169.2-201ENST00000553758 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
AF111169.2-201ENST00000553758 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
AF111169.2-201ENST00000553758 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
AF111169.2-201ENST00000553758 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
AF111169.2-201ENST00000553758 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
AF111169.2-201ENST00000553758 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
AF111169.2-201ENST00000553758 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
AF111169.2-201ENST00000553758 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
AF111169.2-201ENST00000553758 NUP160Q12769 1436 aa23.62■■□□□ 1.37
AF111169.2-201ENST00000553758 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
AF111169.2-201ENST00000553758 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
AF111169.2-201ENST00000553758 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
AF111169.2-201ENST00000553758 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
AF111169.2-201ENST00000553758 ABCC10Q5T3U5 1492 aa23.41■■□□□ 1.34
AF111169.2-201ENST00000553758 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
AF111169.2-201ENST00000553758 BIVM-ERCC5R4GMW8 1640 aa23.39■■□□□ 1.33
AF111169.2-201ENST00000553758 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
AF111169.2-201ENST00000553758 DIP2BQ9P265 1576 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms