RNA–Protein interactions for RNA: ENST00000553652.5

CKB-204, Transcript of creatine kinase B, humanhuman

TSL 5

Gene CKB, Length 1,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-204ENST00000553652 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.68■□□□□ 0.262e-23■■■■■ 66.4
CKB-204ENST00000553652 AATFQ9NY61 560 aaKnown RBP eCLIP21.12■□□□□ 0.972e-21■■■■■ 73.9
CKB-204ENST00000553652 DDX3XO00571 662 aaKnown RBP eCLIP18.71■□□□□ 0.592e-20■■■■□ 25.1
CKB-204ENST00000553652 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.53■□□□□ 0.883e-19■■■■■ 108.1
CKB-204ENST00000553652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.19■□□□□ 0.822e-13■■■■■ 30.7
CKB-204ENST00000553652 NIPBLQ6KC79 2804 aaeCLIP15.67■□□□□ 0.11e-12■■■■■ 72.1
CKB-204ENST00000553652 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.78■□□□□ 0.284e-12■■■■■ 139.7
CKB-204ENST00000553652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.78■□□□□ 0.65e-11■□□□□ 11.1
CKB-204ENST00000553652 PCBP1Q15365 356 aaKnown RBP eCLIP19.46■□□□□ 0.711e-9■■■■■ 49.3
CKB-204ENST00000553652 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.09■□□□□ 0.172e-9■■□□□ 12.5
CKB-204ENST00000553652 YBX3P16989 372 aaKnown RBP eCLIP23.43■■□□□ 1.344e-9■■■□□ 14.9
CKB-204ENST00000553652 METAP2P50579 478 aaKnown RBP eCLIP20.65■□□□□ 0.96e-9■□□□□ 10.6
CKB-204ENST00000553652 GPKOWQ92917 476 aaPredicted RBP eCLIP20.3■□□□□ 0.841e-8■■■■■ 65.4
CKB-204ENST00000553652 NKRFO15226 690 aaKnown RBP eCLIP19.88■□□□□ 0.772e-8■■■■■ 32.4
CKB-204ENST00000553652 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.91■□□□□ 0.463e-8■■■■■ 50.5
CKB-204ENST00000553652 PPIGQ13427 754 aaKnown RBP eCLIP19.89■□□□□ 0.776e-8■■□□□ 13.7
CKB-204ENST00000553652 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.877e-8■■■■■ 41.9
CKB-204ENST00000553652 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.75■□□□□ 0.597e-8■■■■■ 73.4
CKB-204ENST00000553652 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.518e-8■■■■□ 22.3
CKB-204ENST00000553652 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.87■□□□□ 0.778e-8■■■■□ 20
CKB-204ENST00000553652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.13■□□□□ 0.659e-8■□□□□ 10.5
CKB-204ENST00000553652 RPS3P23396 243 aaKnown RBP eCLIP17.52■□□□□ 0.41e-7■■■■□ 25.5
CKB-204ENST00000553652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.741e-7■□□□□ 8.2
CKB-204ENST00000553652 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.43■■□□□ 1.021e-7■■■■□ 19.4
CKB-204ENST00000553652 LARP4Q71RC2 724 aaKnown RBP eCLIP16.88■□□□□ 0.291e-7■■■□□ 17.8
CKB-204ENST00000553652 EFTUD2Q15029 972 aaKnown RBP eCLIP17.53■□□□□ 0.42e-7■■■■□ 23.1
CKB-204ENST00000553652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.81■□□□□ 0.922e-7■□□□□ 10
CKB-204ENST00000553652 SUB1P53999 127 aaKnown RBP eCLIP14.03□□□□□ -0.162e-7■■■■■ 36.9
CKB-204ENST00000553652 DKC1O60832 514 aaKnown RBP eCLIP19.86■□□□□ 0.772e-7■■■■■ 31.2
CKB-204ENST00000553652 RBFOX2O43251 390 aaKnown RBP eCLIP14.34□□□□□ -0.113e-7■■■■□ 20.8
CKB-204ENST00000553652 PRPF4O43172 522 aaKnown RBP eCLIP17.38■□□□□ 0.373e-7■■■□□ 18.7
CKB-204ENST00000553652 PUM1Q14671 1186 aaKnown RBP eCLIP18.74■□□□□ 0.594e-7■■□□□ 14.1
CKB-204ENST00000553652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.67□□□□□ -0.064e-7■■□□□ 13.5
CKB-204ENST00000553652 KHSRPQ92945 711 aaKnown RBP eCLIP19.54■□□□□ 0.724e-7■□□□□ 10.4
CKB-204ENST00000553652 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■■■■ 91.8
CKB-204ENST00000553652 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.81■□□□□ 0.925e-7■■■□□ 16
CKB-204ENST00000553652 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.47e-7■■■■■ 52.5
CKB-204ENST00000553652 SF3B4Q15427 424 aaKnown RBP eCLIP15.93■□□□□ 0.148e-7■■■■□ 26.1
CKB-204ENST00000553652 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.56■□□□□ 0.888e-7■■□□□ 13.1
CKB-204ENST00000553652 TROVE2P10155 538 aaKnown RBP eCLIP17.08■□□□□ 0.329e-7■■■■■ 31
CKB-204ENST00000553652 G3BP1Q13283 466 aaKnown RBP eCLIP21.89■■□□□ 1.091e-6■■□□□ 14.1
CKB-204ENST00000553652 FXR2P51116 673 aaKnown RBP eCLIP19.96■□□□□ 0.791e-6■■■□□ 15.2
CKB-204ENST00000553652 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■■■■ 92.8
CKB-204ENST00000553652 XRCC6P12956 609 aaKnown RBP eCLIP19.77■□□□□ 0.761e-6■■■■□ 23.3
CKB-204ENST00000553652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.55■■■□□ 21e-6■■■□□ 15.8
CKB-204ENST00000553652 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.18■□□□□ 0.662e-6■■■□□ 17.7
CKB-204ENST00000553652 SF3A3Q12874 501 aaKnown RBP eCLIP16.83■□□□□ 0.282e-6■■■■□ 20.3
CKB-204ENST00000553652 FMR1Q06787 632 aaKnown RBP eCLIP21.93■■□□□ 1.12e-6■□□□□ 10.7
CKB-204ENST00000553652 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■■■■■ 30.5
CKB-204ENST00000553652 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.72■□□□□ 0.433e-6■■■■■ 50.5
CKB-204ENST00000553652 TIA1P31483 386 aaKnown RBP eCLIP16.83■□□□□ 0.283e-6■■□□□ 14.1
CKB-204ENST00000553652 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.293e-6■■□□□ 13.3
CKB-204ENST00000553652 SF3B1O75533 1304 aaKnown RBP eCLIP18.89■□□□□ 0.613e-6■■■■■ 51.7
Retrieved 53 of 53 RNA–protein pairs in 24.9 ms