RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
MTHFD1-203ENST00000553391 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
MTHFD1-203ENST00000553391 ZCCHC6Q5VYS8 1495 aaKnown RBP17.4■□□□□ 0.38
MTHFD1-203ENST00000553391 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
MTHFD1-203ENST00000553391 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
MTHFD1-203ENST00000553391 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
MTHFD1-203ENST00000553391 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
MTHFD1-203ENST00000553391 ABCC9O60706 1549 aa16.8■□□□□ 0.28
MTHFD1-203ENST00000553391 NACADO15069 1562 aa16.66■□□□□ 0.26
MTHFD1-203ENST00000553391 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
MTHFD1-203ENST00000553391 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
MTHFD1-203ENST00000553391 RB1CC1Q8TDY2 1594 aa16.43■□□□□ 0.22
MTHFD1-203ENST00000553391 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
MTHFD1-203ENST00000553391 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1-203ENST00000553391 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
MTHFD1-203ENST00000553391 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
MTHFD1-203ENST00000553391 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
MTHFD1-203ENST00000553391 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
MTHFD1-203ENST00000553391 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
MTHFD1-203ENST00000553391 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
MTHFD1-203ENST00000553391 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
MTHFD1-203ENST00000553391 WIZO95785 1651 aa15.82■□□□□ 0.12
MTHFD1-203ENST00000553391 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
MTHFD1-203ENST00000553391 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
MTHFD1-203ENST00000553391 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
MTHFD1-203ENST00000553391 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
MTHFD1-203ENST00000553391 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
MTHFD1-203ENST00000553391 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
MTHFD1-203ENST00000553391 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
MTHFD1-203ENST00000553391 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
MTHFD1-203ENST00000553391 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
MTHFD1-203ENST00000553391 LOC105371045A0A1W2PR82 267 aa15.45■□□□□ 0.06
MTHFD1-203ENST00000553391 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
MTHFD1-203ENST00000553391 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
MTHFD1-203ENST00000553391 FAM9AQ8IZU1 332 aaPredicted RBP15.29■□□□□ 0.04
MTHFD1-203ENST00000553391 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
MTHFD1-203ENST00000553391 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
MTHFD1-203ENST00000553391 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
MTHFD1-203ENST00000553391 CFTRP13569 1480 aa15.14■□□□□ 0.01
MTHFD1-203ENST00000553391 SOGA1O94964 1423 aa15.12■□□□□ 0.01
MTHFD1-203ENST00000553391 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
MTHFD1-203ENST00000553391 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
MTHFD1-203ENST00000553391 EEA1Q15075 1411 aa15.09■□□□□ 0.01
MTHFD1-203ENST00000553391 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
MTHFD1-203ENST00000553391 SYNJ1O43426 1573 aa15.05■□□□□ -0
MTHFD1-203ENST00000553391 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
MTHFD1-203ENST00000553391 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
MTHFD1-203ENST00000553391 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
MTHFD1-203ENST00000553391 CUX1P39880 1505 aa14.94□□□□□ -0.02
MTHFD1-203ENST00000553391 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
MTHFD1-203ENST00000553391 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
MTHFD1-203ENST00000553391 PCGF6Q9BYE7 350 aa14.89□□□□□ -0.03
MTHFD1-203ENST00000553391 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-203ENST00000553391 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
MTHFD1-203ENST00000553391 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
MTHFD1-203ENST00000553391 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
MTHFD1-203ENST00000553391 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
MTHFD1-203ENST00000553391 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
MTHFD1-203ENST00000553391 NESP48681 1621 aa14.81□□□□□ -0.04
MTHFD1-203ENST00000553391 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
MTHFD1-203ENST00000553391 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
MTHFD1-203ENST00000553391 KIF21BO75037 1637 aa14.8□□□□□ -0.04
MTHFD1-203ENST00000553391 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
MTHFD1-203ENST00000553391 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
MTHFD1-203ENST00000553391 IGF1RP08069 1367 aa14.76□□□□□ -0.05
MTHFD1-203ENST00000553391 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
MTHFD1-203ENST00000553391 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
MTHFD1-203ENST00000553391 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
MTHFD1-203ENST00000553391 TOPBP1Q92547 1522 aa14.71□□□□□ -0.06
MTHFD1-203ENST00000553391 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
MTHFD1-203ENST00000553391 CUX2O14529 1486 aa14.69□□□□□ -0.06
MTHFD1-203ENST00000553391 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
MTHFD1-203ENST00000553391 CLIP1P30622 1438 aa14.66□□□□□ -0.06
MTHFD1-203ENST00000553391 HRCP23327 699 aa14.65□□□□□ -0.06
MTHFD1-203ENST00000553391 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.06
MTHFD1-203ENST00000553391 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
MTHFD1-203ENST00000553391 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
MTHFD1-203ENST00000553391 CARMIL1Q5VZK9 1371 aa14.64□□□□□ -0.07
MTHFD1-203ENST00000553391 PPARGC1BQ86YN6 1023 aaKnown RBP14.64□□□□□ -0.07
MTHFD1-203ENST00000553391 ABCA10Q8WWZ4 1543 aa14.64□□□□□ -0.07
MTHFD1-203ENST00000553391 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
MTHFD1-203ENST00000553391 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
MTHFD1-203ENST00000553391 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
MTHFD1-203ENST00000553391 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
MTHFD1-203ENST00000553391 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
MTHFD1-203ENST00000553391 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
MTHFD1-203ENST00000553391 GAPVD1Q14C86 1478 aa14.46□□□□□ -0.09
MTHFD1-203ENST00000553391 APLP2Q06481 763 aa14.46□□□□□ -0.09
MTHFD1-203ENST00000553391 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
MTHFD1-203ENST00000553391 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
MTHFD1-203ENST00000553391 TARBP1Q13395 1621 aaKnown RBP14.43□□□□□ -0.1
MTHFD1-203ENST00000553391 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
MTHFD1-203ENST00000553391 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
MTHFD1-203ENST00000553391 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
MTHFD1-203ENST00000553391 CUL7Q14999 1698 aa14.39□□□□□ -0.11
MTHFD1-203ENST00000553391 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
MTHFD1-203ENST00000553391 WDR62O43379 1518 aa14.38□□□□□ -0.11
MTHFD1-203ENST00000553391 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
MTHFD1-203ENST00000553391 KANK4Q5T7N3 995 aaPredicted RBP14.36□□□□□ -0.11
MTHFD1-203ENST00000553391 FHAD1B1AJZ9 1412 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms