RNA–Protein interactions for RNA: ENST00000553388.1
Retrieved 5 of 5 RNA–protein pairs in 5.4 ms
PSMD10-207, Transcript of proteasome 26S subunit, non-ATPase 10, human
TSL 1 (best)
Gene PSMD10, Length 1,039 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
PSMD10-207 | ENST00000553388 | AQR | O60306 | 1485 aa | Known RBP eCLIP | 8 | □□□□□ -1.13 | 9e-10 | ■■■■■ 41.2 |
PSMD10-207 | ENST00000553388 | EIF3G | O75821 | 320 aa | Known RBP eCLIP | 3.69 | □□□□□ -1.82 | 7e-8 | ■■■■■ 36.4 |
PSMD10-207 | ENST00000553388 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 7.38 | □□□□□ -1.23 | 3e-7 | ■■□□□ 11.9 |
PSMD10-207 | ENST00000553388 | RPS3 | P23396 | 243 aa | Known RBP eCLIP | 4.65 | □□□□□ -1.67 | 4e-7 | ■■■■■ 31 |
PSMD10-207 | ENST00000553388 | YBX3 | P16989 | 372 aa | Known RBP eCLIP | 9.03 | □□□□□ -0.96 | 4e-7 | ■□□□□ 9.2 |