RNA–Protein interactions for RNA: ENST00000553314.1

TIMELESS-202, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-202ENST00000553314 NISCHQ9Y2I1 1504 aa18.92■□□□□ 0.62
TIMELESS-202ENST00000553314 ABCC9O60706 1549 aa17.96■□□□□ 0.47
TIMELESS-202ENST00000553314 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
TIMELESS-202ENST00000553314 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
TIMELESS-202ENST00000553314 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
TIMELESS-202ENST00000553314 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
TIMELESS-202ENST00000553314 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
TIMELESS-202ENST00000553314 NACADO15069 1562 aa16.43■□□□□ 0.22
TIMELESS-202ENST00000553314 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
TIMELESS-202ENST00000553314 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
TIMELESS-202ENST00000553314 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
TIMELESS-202ENST00000553314 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
TIMELESS-202ENST00000553314 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
TIMELESS-202ENST00000553314 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
TIMELESS-202ENST00000553314 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
TIMELESS-202ENST00000553314 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
TIMELESS-202ENST00000553314 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
TIMELESS-202ENST00000553314 CUX2O14529 1486 aa15.65■□□□□ 0.1
TIMELESS-202ENST00000553314 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
TIMELESS-202ENST00000553314 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
TIMELESS-202ENST00000553314 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
TIMELESS-202ENST00000553314 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
TIMELESS-202ENST00000553314 NESP48681 1621 aa15.23■□□□□ 0.03
TIMELESS-202ENST00000553314 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
TIMELESS-202ENST00000553314 NCAPD3P42695 1498 aa15.16■□□□□ 0.02
TIMELESS-202ENST00000553314 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
TIMELESS-202ENST00000553314 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
TIMELESS-202ENST00000553314 HMGXB3Q12766 1538 aa15.03■□□□□ -0
TIMELESS-202ENST00000553314 KIF21AQ7Z4S6 1674 aa14.98□□□□□ -0.01
TIMELESS-202ENST00000553314 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
TIMELESS-202ENST00000553314 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
TIMELESS-202ENST00000553314 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
TIMELESS-202ENST00000553314 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
TIMELESS-202ENST00000553314 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
TIMELESS-202ENST00000553314 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
TIMELESS-202ENST00000553314 AEBP2Q6ZN18 517 aaPredicted RBP14.88□□□□□ -0.03
TIMELESS-202ENST00000553314 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
TIMELESS-202ENST00000553314 WDR62O43379 1518 aa14.81□□□□□ -0.04
TIMELESS-202ENST00000553314 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
TIMELESS-202ENST00000553314 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
TIMELESS-202ENST00000553314 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
TIMELESS-202ENST00000553314 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
TIMELESS-202ENST00000553314 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
TIMELESS-202ENST00000553314 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
TIMELESS-202ENST00000553314 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
TIMELESS-202ENST00000553314 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
TIMELESS-202ENST00000553314 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
TIMELESS-202ENST00000553314 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
TIMELESS-202ENST00000553314 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
TIMELESS-202ENST00000553314 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
TIMELESS-202ENST00000553314 ARAP1Q96P48 1450 aa14.45□□□□□ -0.1
TIMELESS-202ENST00000553314 ZNF608Q9ULD9 1512 aaPredicted RBP14.45□□□□□ -0.1
TIMELESS-202ENST00000553314 WIZO95785 1651 aa14.4□□□□□ -0.1
TIMELESS-202ENST00000553314 CFTRP13569 1480 aa14.4□□□□□ -0.1
TIMELESS-202ENST00000553314 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
TIMELESS-202ENST00000553314 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
TIMELESS-202ENST00000553314 FBLN2P98095 1184 aa14.34□□□□□ -0.11
TIMELESS-202ENST00000553314 CHD1O14646 1710 aa14.32□□□□□ -0.12
TIMELESS-202ENST00000553314 RSF1Q96T23 1441 aaPredicted RBP14.3□□□□□ -0.12
TIMELESS-202ENST00000553314 AQRO60306 1485 aaKnown RBP eCLIP14.24□□□□□ -0.13
TIMELESS-202ENST00000553314 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
TIMELESS-202ENST00000553314 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
TIMELESS-202ENST00000553314 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
TIMELESS-202ENST00000553314 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
TIMELESS-202ENST00000553314 CLASP1Q7Z460 1538 aa14.13□□□□□ -0.15
TIMELESS-202ENST00000553314 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
TIMELESS-202ENST00000553314 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
TIMELESS-202ENST00000553314 SNAPC4Q5SXM2 1469 aa14.1□□□□□ -0.15
TIMELESS-202ENST00000553314 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
TIMELESS-202ENST00000553314 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
TIMELESS-202ENST00000553314 GAPVD1Q14C86 1478 aa14.07□□□□□ -0.16
TIMELESS-202ENST00000553314 CHMP7Q8WUX9 453 aaPredicted RBP14.06□□□□□ -0.16
TIMELESS-202ENST00000553314 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
TIMELESS-202ENST00000553314 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
TIMELESS-202ENST00000553314 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
TIMELESS-202ENST00000553314 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
TIMELESS-202ENST00000553314 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
TIMELESS-202ENST00000553314 SOGA1O94964 1423 aa13.96□□□□□ -0.18
TIMELESS-202ENST00000553314 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
TIMELESS-202ENST00000553314 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
TIMELESS-202ENST00000553314 ERCC6L2Q5T890 1561 aa13.91□□□□□ -0.18
TIMELESS-202ENST00000553314 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
TIMELESS-202ENST00000553314 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
TIMELESS-202ENST00000553314 KDM4FA0A1W2PPD8 638 aa13.86□□□□□ -0.19
TIMELESS-202ENST00000553314 KIF13AQ9H1H9 1805 aa13.84□□□□□ -0.19
TIMELESS-202ENST00000553314 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
TIMELESS-202ENST00000553314 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
TIMELESS-202ENST00000553314 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
TIMELESS-202ENST00000553314 KDM6BO15054 1643 aa13.78□□□□□ -0.2
TIMELESS-202ENST00000553314 CUX1P39880 1505 aa13.77□□□□□ -0.21
TIMELESS-202ENST00000553314 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
TIMELESS-202ENST00000553314 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
TIMELESS-202ENST00000553314 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
TIMELESS-202ENST00000553314 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
TIMELESS-202ENST00000553314 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
TIMELESS-202ENST00000553314 DIP2BQ9P265 1576 aa13.71□□□□□ -0.22
TIMELESS-202ENST00000553314 NUP160Q12769 1436 aa13.7□□□□□ -0.22
TIMELESS-202ENST00000553314 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
TIMELESS-202ENST00000553314 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
TIMELESS-202ENST00000553314 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms