RNA–Protein interactions for RNA: ENST00000553009.5

COPZ1-217, Transcript of coatomer protein complex subunit zeta 1, humanhuman

TSL 3

Gene COPZ1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPZ1-217ENST00000553009 NISCHQ9Y2I1 1504 aa32.32■■■□□ 2.76
COPZ1-217ENST00000553009 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
COPZ1-217ENST00000553009 ABCC9O60706 1549 aa27.28■■□□□ 1.96
COPZ1-217ENST00000553009 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
COPZ1-217ENST00000553009 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
COPZ1-217ENST00000553009 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
COPZ1-217ENST00000553009 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
COPZ1-217ENST00000553009 NACADO15069 1562 aa26.63■■□□□ 1.85
COPZ1-217ENST00000553009 RB1CC1Q8TDY2 1594 aa26.53■■□□□ 1.84
COPZ1-217ENST00000553009 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
COPZ1-217ENST00000553009 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
COPZ1-217ENST00000553009 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
COPZ1-217ENST00000553009 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
COPZ1-217ENST00000553009 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
COPZ1-217ENST00000553009 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
COPZ1-217ENST00000553009 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
COPZ1-217ENST00000553009 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
COPZ1-217ENST00000553009 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
COPZ1-217ENST00000553009 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
COPZ1-217ENST00000553009 RSF1Q96T23 1441 aaPredicted RBP24.84■■□□□ 1.57
COPZ1-217ENST00000553009 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
COPZ1-217ENST00000553009 WIZO95785 1651 aa24.72■■□□□ 1.55
COPZ1-217ENST00000553009 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
COPZ1-217ENST00000553009 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
COPZ1-217ENST00000553009 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
COPZ1-217ENST00000553009 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
COPZ1-217ENST00000553009 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
COPZ1-217ENST00000553009 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
COPZ1-217ENST00000553009 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
COPZ1-217ENST00000553009 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
COPZ1-217ENST00000553009 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
COPZ1-217ENST00000553009 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
COPZ1-217ENST00000553009 CFTRP13569 1480 aa23.85■■□□□ 1.41
COPZ1-217ENST00000553009 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
COPZ1-217ENST00000553009 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
COPZ1-217ENST00000553009 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
COPZ1-217ENST00000553009 NESP48681 1621 aa23.79■■□□□ 1.4
COPZ1-217ENST00000553009 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
COPZ1-217ENST00000553009 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
COPZ1-217ENST00000553009 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
COPZ1-217ENST00000553009 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
COPZ1-217ENST00000553009 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
COPZ1-217ENST00000553009 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
COPZ1-217ENST00000553009 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
COPZ1-217ENST00000553009 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
COPZ1-217ENST00000553009 MRC2Q9UBG0 1479 aa23.37■■□□□ 1.33
COPZ1-217ENST00000553009 CUX1P39880 1505 aa23.37■■□□□ 1.33
COPZ1-217ENST00000553009 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
COPZ1-217ENST00000553009 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
COPZ1-217ENST00000553009 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
COPZ1-217ENST00000553009 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
COPZ1-217ENST00000553009 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
COPZ1-217ENST00000553009 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
COPZ1-217ENST00000553009 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
COPZ1-217ENST00000553009 WDR62O43379 1518 aa23.28■■□□□ 1.32
COPZ1-217ENST00000553009 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
COPZ1-217ENST00000553009 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
COPZ1-217ENST00000553009 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
COPZ1-217ENST00000553009 CUX2O14529 1486 aa23.05■■□□□ 1.28
COPZ1-217ENST00000553009 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
COPZ1-217ENST00000553009 SOGA1O94964 1423 aa23.02■■□□□ 1.28
COPZ1-217ENST00000553009 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
COPZ1-217ENST00000553009 TARBP1Q13395 1621 aaKnown RBP23.02■■□□□ 1.28
COPZ1-217ENST00000553009 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
COPZ1-217ENST00000553009 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
COPZ1-217ENST00000553009 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
COPZ1-217ENST00000553009 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
COPZ1-217ENST00000553009 EEA1Q15075 1411 aa22.86■■□□□ 1.25
COPZ1-217ENST00000553009 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
COPZ1-217ENST00000553009 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
COPZ1-217ENST00000553009 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
COPZ1-217ENST00000553009 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
COPZ1-217ENST00000553009 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
COPZ1-217ENST00000553009 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
COPZ1-217ENST00000553009 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.248e-7■■■■□ 23.2
COPZ1-217ENST00000553009 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
COPZ1-217ENST00000553009 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
COPZ1-217ENST00000553009 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
COPZ1-217ENST00000553009 CUL7Q14999 1698 aa22.68■■□□□ 1.22
COPZ1-217ENST00000553009 IGF1RP08069 1367 aa22.66■■□□□ 1.22
COPZ1-217ENST00000553009 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
COPZ1-217ENST00000553009 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
COPZ1-217ENST00000553009 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
COPZ1-217ENST00000553009 KIF21BO75037 1637 aa22.62■■□□□ 1.21
COPZ1-217ENST00000553009 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
COPZ1-217ENST00000553009 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
COPZ1-217ENST00000553009 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
COPZ1-217ENST00000553009 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
COPZ1-217ENST00000553009 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
COPZ1-217ENST00000553009 GOLGA3Q08378 1498 aa22.52■■□□□ 1.2
COPZ1-217ENST00000553009 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
COPZ1-217ENST00000553009 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
COPZ1-217ENST00000553009 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
COPZ1-217ENST00000553009 CHD1O14646 1710 aa22.43■■□□□ 1.18
COPZ1-217ENST00000553009 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
COPZ1-217ENST00000553009 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
COPZ1-217ENST00000553009 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
COPZ1-217ENST00000553009 FBLN2P98095 1184 aa22.36■■□□□ 1.17
COPZ1-217ENST00000553009 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.17
COPZ1-217ENST00000553009 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms