RNA–Protein interactions for RNA: ENST00000553006.1

AC012038.2-201, humanhuman

TSL 3 BASIC

Gene AC012038.2, Length 256 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012038.2-201ENST00000553006 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
AC012038.2-201ENST00000553006 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
AC012038.2-201ENST00000553006 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
AC012038.2-201ENST00000553006 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
AC012038.2-201ENST00000553006 FOXD1Q16676 465 aa16.19■□□□□ 0.18
AC012038.2-201ENST00000553006 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
AC012038.2-201ENST00000553006 MSH5O43196 834 aa15.13■□□□□ 0.01
AC012038.2-201ENST00000553006 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
AC012038.2-201ENST00000553006 NISCHQ9Y2I1 1504 aa15.08■□□□□ 0.01
AC012038.2-201ENST00000553006 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
AC012038.2-201ENST00000553006 ADRA2BP18089 450 aa15.02■□□□□ -0
AC012038.2-201ENST00000553006 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
AC012038.2-201ENST00000553006 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
AC012038.2-201ENST00000553006 DMRT2Q9Y5R5 561 aa13.78□□□□□ -0.2
AC012038.2-201ENST00000553006 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
AC012038.2-201ENST00000553006 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
AC012038.2-201ENST00000553006 CCDC180Q9P1Z9 1646 aa13.4□□□□□ -0.26
AC012038.2-201ENST00000553006 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
AC012038.2-201ENST00000553006 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
AC012038.2-201ENST00000553006 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
AC012038.2-201ENST00000553006 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
AC012038.2-201ENST00000553006 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
AC012038.2-201ENST00000553006 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
AC012038.2-201ENST00000553006 ABCC9O60706 1549 aa12.91□□□□□ -0.34
AC012038.2-201ENST00000553006 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
AC012038.2-201ENST00000553006 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
AC012038.2-201ENST00000553006 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
AC012038.2-201ENST00000553006 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
AC012038.2-201ENST00000553006 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
AC012038.2-201ENST00000553006 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
AC012038.2-201ENST00000553006 NACADO15069 1562 aa12.56□□□□□ -0.4
AC012038.2-201ENST00000553006 DCAF1Q9Y4B6 1507 aa12.53□□□□□ -0.4
AC012038.2-201ENST00000553006 RB1CC1Q8TDY2 1594 aa12.53□□□□□ -0.4
AC012038.2-201ENST00000553006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
AC012038.2-201ENST00000553006 KCNA4P22459 653 aa12.47□□□□□ -0.41
AC012038.2-201ENST00000553006 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
AC012038.2-201ENST00000553006 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
AC012038.2-201ENST00000553006 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
AC012038.2-201ENST00000553006 UNC13AQ9UPW8 1703 aa12.21□□□□□ -0.45
AC012038.2-201ENST00000553006 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
AC012038.2-201ENST00000553006 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
AC012038.2-201ENST00000553006 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
AC012038.2-201ENST00000553006 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
AC012038.2-201ENST00000553006 DSG3P32926 999 aa12.1□□□□□ -0.47
AC012038.2-201ENST00000553006 CAPN15O75808 1086 aa12.06□□□□□ -0.48
AC012038.2-201ENST00000553006 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
AC012038.2-201ENST00000553006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
AC012038.2-201ENST00000553006 APLP2Q06481 763 aa11.91□□□□□ -0.5
AC012038.2-201ENST00000553006 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
AC012038.2-201ENST00000553006 ZNF219Q9P2Y4 722 aaPredicted RBP11.88□□□□□ -0.51
AC012038.2-201ENST00000553006 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
AC012038.2-201ENST00000553006 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
AC012038.2-201ENST00000553006 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
AC012038.2-201ENST00000553006 ABCB7O75027 752 aa11.8□□□□□ -0.52
AC012038.2-201ENST00000553006 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
AC012038.2-201ENST00000553006 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
AC012038.2-201ENST00000553006 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.54
AC012038.2-201ENST00000553006 BAZ1AQ9NRL2 1556 aaPredicted RBP11.71□□□□□ -0.54
AC012038.2-201ENST00000553006 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
AC012038.2-201ENST00000553006 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
AC012038.2-201ENST00000553006 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
AC012038.2-201ENST00000553006 POTEHQ6S545 545 aa11.61□□□□□ -0.55
AC012038.2-201ENST00000553006 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
AC012038.2-201ENST00000553006 MROH2BQ7Z745 1585 aa11.6□□□□□ -0.55
AC012038.2-201ENST00000553006 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
AC012038.2-201ENST00000553006 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
AC012038.2-201ENST00000553006 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
AC012038.2-201ENST00000553006 POLA2Q14181 598 aa11.57□□□□□ -0.56
AC012038.2-201ENST00000553006 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
AC012038.2-201ENST00000553006 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
AC012038.2-201ENST00000553006 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
AC012038.2-201ENST00000553006 ZBTB22O15209 634 aa11.51□□□□□ -0.57
AC012038.2-201ENST00000553006 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
AC012038.2-201ENST00000553006 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
AC012038.2-201ENST00000553006 WIZO95785 1651 aa11.47□□□□□ -0.57
AC012038.2-201ENST00000553006 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.58
AC012038.2-201ENST00000553006 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
AC012038.2-201ENST00000553006 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
AC012038.2-201ENST00000553006 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
AC012038.2-201ENST00000553006 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
AC012038.2-201ENST00000553006 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
AC012038.2-201ENST00000553006 SUPT5HO00267 1087 aaKnown RBP11.24□□□□□ -0.61
AC012038.2-201ENST00000553006 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
AC012038.2-201ENST00000553006 CCDC88BA6NC98 1476 aa11.23□□□□□ -0.61
AC012038.2-201ENST00000553006 CFTRP13569 1480 aa11.2□□□□□ -0.62
AC012038.2-201ENST00000553006 OSCARQ8IYS5 282 aa11.2□□□□□ -0.62
AC012038.2-201ENST00000553006 NESP48681 1621 aa11.2□□□□□ -0.62
AC012038.2-201ENST00000553006 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
AC012038.2-201ENST00000553006 ERCC6Q03468 1493 aa11.15□□□□□ -0.62
AC012038.2-201ENST00000553006 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
AC012038.2-201ENST00000553006 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
AC012038.2-201ENST00000553006 KIF21AQ7Z4S6 1674 aa11.09□□□□□ -0.63
AC012038.2-201ENST00000553006 FANCD2Q9BXW9 1451 aa11.09□□□□□ -0.63
AC012038.2-201ENST00000553006 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
AC012038.2-201ENST00000553006 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
AC012038.2-201ENST00000553006 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
AC012038.2-201ENST00000553006 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
AC012038.2-201ENST00000553006 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
AC012038.2-201ENST00000553006 CUX2O14529 1486 aa11.02□□□□□ -0.65
AC012038.2-201ENST00000553006 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms