RNA–Protein interactions for RNA: ENST00000552848.5

COPZ1-216, Transcript of coatomer protein complex subunit zeta 1, humanhuman

TSL 5

Gene COPZ1, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPZ1-216ENST00000552848 SF3B1O75533 1304 aaKnown RBP eCLIP11.33□□□□□ -0.69e-7■■■■■ 94.2
COPZ1-216ENST00000552848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.19□□□□□ -0.788e-8■■■■■ 64.8
COPZ1-216ENST00000552848 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.86□□□□□ -0.832e-17■■■■■ 53.6
COPZ1-216ENST00000552848 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.048e-8■■■■■ 37.7
COPZ1-216ENST00000552848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.213e-8■■■■■ 33.2
COPZ1-216ENST00000552848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■■□ 24.3
COPZ1-216ENST00000552848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■■□ 23.9
COPZ1-216ENST00000552848 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.645e-7■■■■□ 23.2
COPZ1-216ENST00000552848 SUB1P53999 127 aaKnown RBP eCLIP7.82□□□□□ -1.169e-13■■■■□ 22.9
COPZ1-216ENST00000552848 RPS3P23396 243 aaKnown RBP eCLIP9.65□□□□□ -0.861e-7■■■■□ 22.3
COPZ1-216ENST00000552848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.1□□□□□ -0.955e-14■■■■□ 21.3
COPZ1-216ENST00000552848 TARDBPQ13148 414 aaKnown RBP eCLIP10.61□□□□□ -0.713e-6■■■■□ 20.1
COPZ1-216ENST00000552848 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.181e-6■■■□□ 18.8
COPZ1-216ENST00000552848 EFTUD2Q15029 972 aaKnown RBP eCLIP9.86□□□□□ -0.831e-8■■■□□ 15.4
COPZ1-216ENST00000552848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.174e-7■■□□□ 14.2
COPZ1-216ENST00000552848 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.413e-6■■□□□ 13.7
COPZ1-216ENST00000552848 EIF3GO75821 320 aaKnown RBP eCLIP7.63□□□□□ -1.197e-7■■□□□ 12.9
COPZ1-216ENST00000552848 DDX3XO00571 662 aaKnown RBP eCLIP10.41□□□□□ -0.741e-12■■□□□ 12.7
COPZ1-216ENST00000552848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.78□□□□□ -0.689e-6■□□□□ 11.3
COPZ1-216ENST00000552848 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.453e-10■□□□□ 11
COPZ1-216ENST00000552848 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.24□□□□□ -0.938e-6■□□□□ 10.6
COPZ1-216ENST00000552848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■□□□□ 9.5
COPZ1-216ENST00000552848 SF3B4Q15427 424 aaKnown RBP eCLIP9.32□□□□□ -0.922e-12■□□□□ 8.9
COPZ1-216ENST00000552848 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.116e-23■□□□□ 8.9
Retrieved 24 of 24 RNA–protein pairs in 142.3 ms