RNA–Protein interactions for RNA: ENST00000552618.5

TMTC1-207, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 5 BASIC

Gene TMTC1, Length 3,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-207ENST00000552618 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
TMTC1-207ENST00000552618 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
TMTC1-207ENST00000552618 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
TMTC1-207ENST00000552618 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
TMTC1-207ENST00000552618 EHMT2Q96KQ7 1210 aa25.15■■□□□ 1.62
TMTC1-207ENST00000552618 ABCC9O60706 1549 aa24.51■■□□□ 1.51
TMTC1-207ENST00000552618 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.49
TMTC1-207ENST00000552618 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
TMTC1-207ENST00000552618 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
TMTC1-207ENST00000552618 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
TMTC1-207ENST00000552618 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
TMTC1-207ENST00000552618 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
TMTC1-207ENST00000552618 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
TMTC1-207ENST00000552618 SCRIBQ14160 1630 aa23.7■■□□□ 1.39
TMTC1-207ENST00000552618 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
TMTC1-207ENST00000552618 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
TMTC1-207ENST00000552618 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
TMTC1-207ENST00000552618 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
TMTC1-207ENST00000552618 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
TMTC1-207ENST00000552618 HRCP23327 699 aa23.16■■□□□ 1.3
TMTC1-207ENST00000552618 CCER1Q8TC90 406 aaPredicted RBP23.15■■□□□ 1.3
TMTC1-207ENST00000552618 NACADO15069 1562 aa23.14■■□□□ 1.29
TMTC1-207ENST00000552618 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
TMTC1-207ENST00000552618 YTHDC1Q96MU7 727 aaKnown RBP23.05■■□□□ 1.28
TMTC1-207ENST00000552618 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
TMTC1-207ENST00000552618 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
TMTC1-207ENST00000552618 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
TMTC1-207ENST00000552618 APLP2Q06481 763 aa22.93■■□□□ 1.26
TMTC1-207ENST00000552618 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.24
TMTC1-207ENST00000552618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
TMTC1-207ENST00000552618 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
TMTC1-207ENST00000552618 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
TMTC1-207ENST00000552618 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
TMTC1-207ENST00000552618 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.2
TMTC1-207ENST00000552618 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
TMTC1-207ENST00000552618 ITGAEP38570 1179 aa22.56■■□□□ 1.2
TMTC1-207ENST00000552618 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
TMTC1-207ENST00000552618 CENPBP07199 599 aaPredicted RBP22.5■■□□□ 1.19
TMTC1-207ENST00000552618 WIZO95785 1651 aa22.43■■□□□ 1.18
TMTC1-207ENST00000552618 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
TMTC1-207ENST00000552618 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
TMTC1-207ENST00000552618 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
TMTC1-207ENST00000552618 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
TMTC1-207ENST00000552618 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
TMTC1-207ENST00000552618 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
TMTC1-207ENST00000552618 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
TMTC1-207ENST00000552618 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
TMTC1-207ENST00000552618 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
TMTC1-207ENST00000552618 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
TMTC1-207ENST00000552618 GTF3C3Q9Y5Q9 886 aa22.01■■□□□ 1.11
TMTC1-207ENST00000552618 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
TMTC1-207ENST00000552618 SOGA1O94964 1423 aa21.98■■□□□ 1.11
TMTC1-207ENST00000552618 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
TMTC1-207ENST00000552618 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
TMTC1-207ENST00000552618 POLR3GLQ9BT43 218 aa21.87■■□□□ 1.09
TMTC1-207ENST00000552618 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
TMTC1-207ENST00000552618 BCANQ96GW7 911 aa21.84■■□□□ 1.09
TMTC1-207ENST00000552618 FBLN2P98095 1184 aa21.8■■□□□ 1.08
TMTC1-207ENST00000552618 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
TMTC1-207ENST00000552618 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
TMTC1-207ENST00000552618 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
TMTC1-207ENST00000552618 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
TMTC1-207ENST00000552618 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
TMTC1-207ENST00000552618 NEFLP07196 543 aa21.7■■□□□ 1.06
TMTC1-207ENST00000552618 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
TMTC1-207ENST00000552618 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
TMTC1-207ENST00000552618 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
TMTC1-207ENST00000552618 CLIP1P30622 1438 aa21.65■■□□□ 1.06
TMTC1-207ENST00000552618 EEA1Q15075 1411 aa21.65■■□□□ 1.06
TMTC1-207ENST00000552618 GOLGA3Q08378 1498 aa21.64■■□□□ 1.06
TMTC1-207ENST00000552618 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
TMTC1-207ENST00000552618 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
TMTC1-207ENST00000552618 ACIN1Q9UKV3 1341 aaKnown RBP21.58■■□□□ 1.05
TMTC1-207ENST00000552618 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
TMTC1-207ENST00000552618 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
TMTC1-207ENST00000552618 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
TMTC1-207ENST00000552618 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
TMTC1-207ENST00000552618 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
TMTC1-207ENST00000552618 CUX2O14529 1486 aa21.51■■□□□ 1.03
TMTC1-207ENST00000552618 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
TMTC1-207ENST00000552618 HIRIP3Q9BW71 556 aaPredicted RBP21.42■■□□□ 1.02
TMTC1-207ENST00000552618 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
TMTC1-207ENST00000552618 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
TMTC1-207ENST00000552618 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
TMTC1-207ENST00000552618 MIER1Q8N108 512 aa21.33■■□□□ 1.01
TMTC1-207ENST00000552618 SYNJ1O43426 1573 aa21.32■■□□□ 1
TMTC1-207ENST00000552618 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
TMTC1-207ENST00000552618 ZNF326Q5BKZ1 582 aaKnown RBP21.3■■□□□ 1
TMTC1-207ENST00000552618 FANCD2Q9BXW9 1451 aa21.3■■□□□ 1
TMTC1-207ENST00000552618 TRIM52Q96A61 297 aa21.29■■□□□ 1
TMTC1-207ENST00000552618 NESP48681 1621 aa21.28■■□□□ 1
TMTC1-207ENST00000552618 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
TMTC1-207ENST00000552618 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
TMTC1-207ENST00000552618 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
TMTC1-207ENST00000552618 SENP3-EIF4A1A0A087X0R7 540 aa21.23■□□□□ 0.99
TMTC1-207ENST00000552618 CFTRP13569 1480 aa21.22■□□□□ 0.99
TMTC1-207ENST00000552618 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
TMTC1-207ENST00000552618 MYT1Q01538 1121 aa21.2■□□□□ 0.98
TMTC1-207ENST00000552618 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
TMTC1-207ENST00000552618 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms