RNA–Protein interactions for RNA: ENST00000552268.5

APAF1-211, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-211ENST00000552268 NSUN2Q08J23 767 aaKnown RBP eCLIP6.65□□□□□ -1.341e-91■■■■■ 317.4
APAF1-211ENST00000552268 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.2□□□□□ -1.265e-15■■■■■ 55
APAF1-211ENST00000552268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.192e-12■■■■■ 39
APAF1-211ENST00000552268 SF3B4Q15427 424 aaKnown RBP eCLIP5.82□□□□□ -1.484e-12■■■■■ 53.5
APAF1-211ENST00000552268 PCBP2Q15366 365 aaKnown RBP eCLIP6.3□□□□□ -1.48e-10■■■■■ 41.4
APAF1-211ENST00000552268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.2□□□□□ -1.15e-9■■■■■ 167.7
APAF1-211ENST00000552268 LSM11P83369 360 aaKnown RBP eCLIP11.19□□□□□ -0.621e-8■■■■■ 91.9
APAF1-211ENST00000552268 U2AF2P26368 475 aaKnown RBP eCLIP7.5□□□□□ -1.218e-8■■□□□ 12.3
APAF1-211ENST00000552268 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.589e-8■■■□□ 18.1
APAF1-211ENST00000552268 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.9□□□□□ -1.142e-6■■■■□ 25.5
APAF1-211ENST00000552268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.28□□□□□ -1.562e-6■■■■□ 24
APAF1-211ENST00000552268 SF3B1O75533 1304 aaKnown RBP eCLIP7.02□□□□□ -1.282e-6■■■■■ 98
APAF1-211ENST00000552268 QKIQ96PU8 341 aaKnown RBP eCLIP6.65□□□□□ -1.342e-6■■■■□ 23
APAF1-211ENST00000552268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.92□□□□□ -1.33e-6■□□□□ 10.3
APAF1-211ENST00000552268 UPF1Q92900 1129 aaKnown RBP eCLIP11.26□□□□□ -0.613e-6■■■■□ 19.5
APAF1-211ENST00000552268 ZNF622Q969S3 477 aaKnown RBP eCLIP8.2□□□□□ -1.13e-6■■□□□ 13.5
APAF1-211ENST00000552268 ZRANB2O95218 330 aaKnown RBP eCLIP6.71□□□□□ -1.344e-6■■■■□ 26.2
APAF1-211ENST00000552268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.967e-6■■■■□ 19.6
APAF1-211ENST00000552268 PCBP1Q15365 356 aaKnown RBP eCLIP7.21□□□□□ -1.269e-6■■□□□ 13.3
APAF1-211ENST00000552268 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.21□□□□□ -1.269e-6■■■■■ 27.7
APAF1-211ENST00000552268 TIA1P31483 386 aaKnown RBP eCLIP6.16□□□□□ -1.429e-6■■■■□ 19.7
Retrieved 21 of 21 RNA–protein pairs in 11.6 ms