RNA–Protein interactions for RNA: ENST00000552238.1

AC007656.1-201, humanhuman

TSL 4 BASIC

Gene AC007656.1, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007656.1-201ENST00000552238 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
AC007656.1-201ENST00000552238 ABCC9O60706 1549 aa29.63■■■□□ 2.33
AC007656.1-201ENST00000552238 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
AC007656.1-201ENST00000552238 CCDC180Q9P1Z9 1646 aa28.36■■■□□ 2.13
AC007656.1-201ENST00000552238 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
AC007656.1-201ENST00000552238 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
AC007656.1-201ENST00000552238 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
AC007656.1-201ENST00000552238 NACADO15069 1562 aa27.12■■□□□ 1.93
AC007656.1-201ENST00000552238 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
AC007656.1-201ENST00000552238 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
AC007656.1-201ENST00000552238 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
AC007656.1-201ENST00000552238 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
AC007656.1-201ENST00000552238 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
AC007656.1-201ENST00000552238 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
AC007656.1-201ENST00000552238 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
AC007656.1-201ENST00000552238 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
AC007656.1-201ENST00000552238 CUX2O14529 1486 aa25.98■■□□□ 1.75
AC007656.1-201ENST00000552238 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
AC007656.1-201ENST00000552238 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
AC007656.1-201ENST00000552238 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
AC007656.1-201ENST00000552238 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
AC007656.1-201ENST00000552238 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
AC007656.1-201ENST00000552238 NESP48681 1621 aa25.12■■□□□ 1.61
AC007656.1-201ENST00000552238 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
AC007656.1-201ENST00000552238 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
AC007656.1-201ENST00000552238 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
AC007656.1-201ENST00000552238 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
AC007656.1-201ENST00000552238 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
AC007656.1-201ENST00000552238 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
AC007656.1-201ENST00000552238 LAMC3Q9Y6N6 1575 aa24.68■■□□□ 1.54
AC007656.1-201ENST00000552238 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
AC007656.1-201ENST00000552238 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
AC007656.1-201ENST00000552238 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
AC007656.1-201ENST00000552238 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
AC007656.1-201ENST00000552238 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
AC007656.1-201ENST00000552238 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
AC007656.1-201ENST00000552238 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
AC007656.1-201ENST00000552238 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
AC007656.1-201ENST00000552238 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
AC007656.1-201ENST00000552238 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
AC007656.1-201ENST00000552238 WDR62O43379 1518 aa24.41■■□□□ 1.5
AC007656.1-201ENST00000552238 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
AC007656.1-201ENST00000552238 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
AC007656.1-201ENST00000552238 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
AC007656.1-201ENST00000552238 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
AC007656.1-201ENST00000552238 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
AC007656.1-201ENST00000552238 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
AC007656.1-201ENST00000552238 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
AC007656.1-201ENST00000552238 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
AC007656.1-201ENST00000552238 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
AC007656.1-201ENST00000552238 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
AC007656.1-201ENST00000552238 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
AC007656.1-201ENST00000552238 CFTRP13569 1480 aa23.71■■□□□ 1.39
AC007656.1-201ENST00000552238 ILDR1Q86SU0 546 aaPredicted RBP23.68■■□□□ 1.38
AC007656.1-201ENST00000552238 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
AC007656.1-201ENST00000552238 CHD1O14646 1710 aa23.67■■□□□ 1.38
AC007656.1-201ENST00000552238 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
AC007656.1-201ENST00000552238 WIZO95785 1651 aa23.61■■□□□ 1.37
AC007656.1-201ENST00000552238 FBLN2P98095 1184 aa23.58■■□□□ 1.37
AC007656.1-201ENST00000552238 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
AC007656.1-201ENST00000552238 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.34
AC007656.1-201ENST00000552238 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
AC007656.1-201ENST00000552238 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
AC007656.1-201ENST00000552238 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
AC007656.1-201ENST00000552238 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
AC007656.1-201ENST00000552238 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
AC007656.1-201ENST00000552238 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
AC007656.1-201ENST00000552238 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
AC007656.1-201ENST00000552238 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
AC007656.1-201ENST00000552238 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
AC007656.1-201ENST00000552238 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
AC007656.1-201ENST00000552238 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
AC007656.1-201ENST00000552238 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
AC007656.1-201ENST00000552238 KDM4FA0A1W2PPD8 638 aa23.11■■□□□ 1.29
AC007656.1-201ENST00000552238 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
AC007656.1-201ENST00000552238 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
AC007656.1-201ENST00000552238 KIF13AQ9H1H9 1805 aa23.03■■□□□ 1.28
AC007656.1-201ENST00000552238 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
AC007656.1-201ENST00000552238 SOGA1O94964 1423 aa22.99■■□□□ 1.27
AC007656.1-201ENST00000552238 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
AC007656.1-201ENST00000552238 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
AC007656.1-201ENST00000552238 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
AC007656.1-201ENST00000552238 GRIN2BQ13224 1484 aa22.89■■□□□ 1.25
AC007656.1-201ENST00000552238 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
AC007656.1-201ENST00000552238 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
AC007656.1-201ENST00000552238 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
AC007656.1-201ENST00000552238 KDM6BO15054 1643 aa22.75■■□□□ 1.23
AC007656.1-201ENST00000552238 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
AC007656.1-201ENST00000552238 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
AC007656.1-201ENST00000552238 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
AC007656.1-201ENST00000552238 HECW2Q9P2P5 1572 aa22.68■■□□□ 1.22
AC007656.1-201ENST00000552238 FBXO41Q8TF61 875 aa22.66■■□□□ 1.22
AC007656.1-201ENST00000552238 TSPOAP1O95153 1857 aa22.62■■□□□ 1.21
AC007656.1-201ENST00000552238 DIP2BQ9P265 1576 aa22.6■■□□□ 1.21
AC007656.1-201ENST00000552238 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
AC007656.1-201ENST00000552238 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
AC007656.1-201ENST00000552238 SHROOM2Q13796 1616 aa22.59■■□□□ 1.21
AC007656.1-201ENST00000552238 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
AC007656.1-201ENST00000552238 CUX1P39880 1505 aa22.55■■□□□ 1.2
AC007656.1-201ENST00000552238 NUP160Q12769 1436 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms