RNA–Protein interactions for RNA: ENST00000552150.5

KRT8-215, Transcript of keratin 8, humanhuman

TSL 1 (best) BASIC

Gene KRT8, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-215ENST00000552150 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
KRT8-215ENST00000552150 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
KRT8-215ENST00000552150 ABCC9O60706 1549 aa32.05■■■□□ 2.72
KRT8-215ENST00000552150 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
KRT8-215ENST00000552150 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
KRT8-215ENST00000552150 DCAF1Q9Y4B6 1507 aa31.18■■■□□ 2.58
KRT8-215ENST00000552150 NACADO15069 1562 aa31.1■■■□□ 2.57
KRT8-215ENST00000552150 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
KRT8-215ENST00000552150 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.55
KRT8-215ENST00000552150 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
KRT8-215ENST00000552150 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
KRT8-215ENST00000552150 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
KRT8-215ENST00000552150 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.411e-7■□□□□ 9.2
KRT8-215ENST00000552150 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
KRT8-215ENST00000552150 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
KRT8-215ENST00000552150 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
KRT8-215ENST00000552150 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.26
KRT8-215ENST00000552150 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
KRT8-215ENST00000552150 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
KRT8-215ENST00000552150 RSF1Q96T23 1441 aaPredicted RBP29■■■□□ 2.23
KRT8-215ENST00000552150 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
KRT8-215ENST00000552150 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
KRT8-215ENST00000552150 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
KRT8-215ENST00000552150 WIZO95785 1651 aa28.85■■■□□ 2.21
KRT8-215ENST00000552150 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
KRT8-215ENST00000552150 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
KRT8-215ENST00000552150 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
KRT8-215ENST00000552150 NCAPD3P42695 1498 aa28.7■■■□□ 2.19
KRT8-215ENST00000552150 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
KRT8-215ENST00000552150 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
KRT8-215ENST00000552150 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
KRT8-215ENST00000552150 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
KRT8-215ENST00000552150 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
KRT8-215ENST00000552150 NESP48681 1621 aa27.9■■■□□ 2.06
KRT8-215ENST00000552150 CFTRP13569 1480 aa27.88■■■□□ 2.05
KRT8-215ENST00000552150 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
KRT8-215ENST00000552150 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
KRT8-215ENST00000552150 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
KRT8-215ENST00000552150 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
KRT8-215ENST00000552150 ERCC6Q03468 1493 aa27.57■■■□□ 2
KRT8-215ENST00000552150 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
KRT8-215ENST00000552150 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
KRT8-215ENST00000552150 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
KRT8-215ENST00000552150 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
KRT8-215ENST00000552150 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
KRT8-215ENST00000552150 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
KRT8-215ENST00000552150 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
KRT8-215ENST00000552150 CUX1P39880 1505 aa27.28■■□□□ 1.96
KRT8-215ENST00000552150 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
KRT8-215ENST00000552150 TOPBP1Q92547 1522 aa27.25■■□□□ 1.95
KRT8-215ENST00000552150 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
KRT8-215ENST00000552150 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
KRT8-215ENST00000552150 WDR62O43379 1518 aa27.22■■□□□ 1.95
KRT8-215ENST00000552150 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
KRT8-215ENST00000552150 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
KRT8-215ENST00000552150 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
KRT8-215ENST00000552150 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
KRT8-215ENST00000552150 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
KRT8-215ENST00000552150 CUX2O14529 1486 aa26.98■■□□□ 1.91
KRT8-215ENST00000552150 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
KRT8-215ENST00000552150 SOGA1O94964 1423 aa26.98■■□□□ 1.91
KRT8-215ENST00000552150 IFT140Q96RY7 1462 aa26.9■■□□□ 1.9
KRT8-215ENST00000552150 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
KRT8-215ENST00000552150 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
KRT8-215ENST00000552150 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
KRT8-215ENST00000552150 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
KRT8-215ENST00000552150 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
KRT8-215ENST00000552150 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.872e-7■■■■■ 29.6
KRT8-215ENST00000552150 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
KRT8-215ENST00000552150 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.87
KRT8-215ENST00000552150 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
KRT8-215ENST00000552150 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
KRT8-215ENST00000552150 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
KRT8-215ENST00000552150 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
KRT8-215ENST00000552150 EEA1Q15075 1411 aa26.58■■□□□ 1.84
KRT8-215ENST00000552150 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
KRT8-215ENST00000552150 PBRM1Q86U86 1689 aa26.55■■□□□ 1.84
KRT8-215ENST00000552150 IGF1RP08069 1367 aa26.53■■□□□ 1.84
KRT8-215ENST00000552150 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
KRT8-215ENST00000552150 CSRNP3Q8WYN3 585 aa26.51■■□□□ 1.83
KRT8-215ENST00000552150 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
KRT8-215ENST00000552150 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
KRT8-215ENST00000552150 CARMIL1Q5VZK9 1371 aa26.4■■□□□ 1.82
KRT8-215ENST00000552150 CUL7Q14999 1698 aa26.39■■□□□ 1.82
KRT8-215ENST00000552150 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
KRT8-215ENST00000552150 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
KRT8-215ENST00000552150 FBLN2P98095 1184 aa26.34■■□□□ 1.81
KRT8-215ENST00000552150 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
KRT8-215ENST00000552150 PRXQ9BXM0 1461 aa26.34■■□□□ 1.81
KRT8-215ENST00000552150 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
KRT8-215ENST00000552150 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
KRT8-215ENST00000552150 RAPGEF2Q9Y4G8 1499 aa26.29■■□□□ 1.8
KRT8-215ENST00000552150 KIF21BO75037 1637 aa26.26■■□□□ 1.79
KRT8-215ENST00000552150 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
KRT8-215ENST00000552150 CHD1O14646 1710 aa26.22■■□□□ 1.79
KRT8-215ENST00000552150 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
KRT8-215ENST00000552150 LOC105371045A0A1W2PR82 267 aa26.18■■□□□ 1.78
KRT8-215ENST00000552150 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
KRT8-215ENST00000552150 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
KRT8-215ENST00000552150 NUP160Q12769 1436 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms